[CP2K-user] [CP2K:17958] cudaErrorStubLibrary runtime error in CP2K
Amit Gupta
amit.welcomes.u at gmail.com
Sun Oct 30 20:58:55 UTC 2022
Hi,
I compiled a CUDA compatible version of CP2K, but when I submit my jobs, I
get the following error:
--------------------------------------------------------------------------
ERROR: cudaErrorStubLibrary
/scratch/ag9288/softwares/cp2k-2022.2/src/offload/offload_library.c 49
forrtl: error (76): Abort trap signal
Image PC Routine Line Source
cp2k.psmp 0000000006B83CAB Unknown Unknown Unknown
libpthread-2.28.s 000014D73245EB20 Unknown Unknown Unknown
libc-2.28.so 000014D712D4037F gsignal Unknown Unknown
libc-2.28.so 000014D712D2ADB5 abort Unknown Unknown
cp2k.psmp 00000000031F8C29 offload_get_devic 49
offload_library.c
cp2k.psmp 0000000001387F46 f77_interface_mp_ 276
f77_interface.F
cp2k.psmp 000000000042281D MAIN__ 284 cp2k.F
cp2k.psmp 0000000006BED096 Unknown Unknown Unknown
libc-2.28.so 000014D712D2C493 __libc_start_main Unknown Unknown
cp2k.psmp 000000000042195E Unknown Unknown Unknown
--------------------------------------------------------------------------
It looks like the executable is unable to find the card, while all the
libraries are correctly loaded.
Version:
Intel fortran: 19.1
cuda : 11.3
openmpi 4.1.1
CP2K: 2022.2
Steps I took to build the binary:
1. Install the toolchain:
./install_cp2k_toolchain.sh --with-intel=system --enable-cuda
--gpu-ver=V100 --with-openmpi=system --with-libxc=install
--with-libint=install --with-fftw=install --with-mkl=system
--with-libxsmm=install --with-elpa=install --with-ptscotch=no
--with-superlu=no --with-pexsi=no --with-quip=no
--with-plumed=no --with-sirius=no --with-gsl=no
--with-libvdwxc=no --with-spglib=no --with-hdf5=no --with-spfft=no
--with-spla=install --with-cosma=install --with-libvori=no
--with-openblas=no -j4
2. Manualy build and copy Libint, for the fortran makefile bug:
https://github.com/cp2k/libint-cp2k/releases
cmake -DCMAKE_C_COMPILER=icc -DCMAKE_C_FLAGS="-qopenmp -O2"
-DCMAKE_CXX_COMPILER=icpc -DCMAKE_CXX_FLAGS="-qopenmp -O2"
-DCMAKE_Fortran_COMPILER=ifort -DCMAKE_Fortran_FLAGS="-qopenmp -O2"
-DREQUIRE_CXX_API=OFF -DENABLE_FORTRAN=ON ..
3. Apply required CUDA patch to CP2K and compile:
https://github.com/cp2k/cp2k/commit/ee6c3aa.patch
make -j 4 ARCH=local_cuda VERSION="ssmp sdbg psmp pdbg"
PS: The job-node is different from the compile node, could that might be an
issue? Also while the compilation went fine, there was an error in
symlinking the binaries.
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