[CP2K-user] [CP2K:16240] something wrong with the section_ROOT

'joey zhang' via cp2k cp2k at googlegroups.com
Tue Nov 16 15:10:42 UTC 2021


It seems to be exactly what i need. Thanks a lot.
在2021年11月16日星期二 UTC+8 下午11:08:13<fabia... at gmail.com> 写道:

> Maybe have a look here: 
> https://askubuntu.com/questions/74485/how-to-display-hidden-characters-in-vim
> On 16.11.2021 15:51, 'joey zhang' via cp2k wrote:
>
> Thanks to your help. The input files have been upload in the previous 
> answers three days before, or  could you tell me how to find these special 
> characters?
>
> 在2021年11月16日星期二 UTC+8 上午1:29:45<fabia... at gmail.com> 写道:
>
>> Hi,
>>
>> I suspect that you still have some special characters in your input 
>> file(s). But you have to provide those files to check...
>>
>> Cheers
>> On 13.11.2021 01:45, 'joey zhang' via cp2k wrote:
>>
>> Thanks for your suggestions. however, a new problem emerges:[image: 
>> problem.png]  I haver looked for information about this problem in 
>> forum. They attribute this problem to the  weird kind  in my input file, 
>> but i have checked my input file for many times, but i can't find anyting 
>> wrong. All the input file are listed above. Could you give me some help?
>>
>> 在2021年11月12日星期五 UTC+8 下午11:22:01<fabia... at gmail.com> 写道:
>>
>>> Hi Joey,
>>>
>>> You have special characters in your files which cp2k cannot handle: 
>>>
>>> tabs (\t) in cp2k.inc and carriage return (\r) in cp2k.inp
>>>
>>> if you are on linux you can do the following:
>>>
>>> sed -i.bak 's/\r//g;s/\t/ /g' cp2k.inp cp2k.inc
>>>
>>> which will remove these characters or convert them to spaces. This 
>>> should solve your issue.
>>>
>>> Cheers,
>>>
>>> Fabian
>>> On 12.11.2021 15:57, 'joey zhang' via cp2k wrote:
>>>
>>> Thanks for your help, here is my input file  
>>> 在2021年11月12日星期五 UTC+8 下午5:07:09<Matthias Krack> 写道:
>>>
>>>> Hi Joey
>>>>
>>>>  
>>>>
>>>> Please, provide the full CP2K input file. Otherwise, one can only guess 
>>>> what the problem is.
>>>>
>>>>  
>>>>
>>>> Matthias
>>>>
>>>>  
>>>>
>>>> *Von:* 'joey zhang' via cp2k <cp... at googlegroups.com> 
>>>> *Gesendet:* Freitag, 12. November 2021 09:28
>>>> *An:* cp2k <cp... at googlegroups.com>
>>>> *Betreff:* [CP2K:16216] something wrong with the section_ROOT
>>>>
>>>>  
>>>>
>>>> Hi, all
>>>>
>>>>   i am new to cp2k, please  forgive me for my questions may be a trival.
>>>>
>>>> when i submit the AIMD task on the server, it died immediately. The 
>>>> cp2k.out presents that  "found an  unknown keyword N in section_ROOT_". I 
>>>> guess it might be something wrong with the pseupotential or basis-set of 
>>>> element N. But i did't find anything wrong.  And i also search the 
>>>> section_ROOT in the manual, i found no results. Have you ever met such 
>>>> problem?
>>>>
>>>> [image: section_ROOT.png]
>>>>
>>>>  
>>>>
>>>> [image: pseupotential.png]
>>>>
>>>>
>>>> best wishes
>>>>
>>>> joey
>>>>
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