[CP2K-user] [CP2K:14868] Restart with atom kind error

Amami Haruka amami... at gmail.com
Wed Mar 3 15:45:36 UTC 2021


Sorry, there seems to be a problem with attaching files.


> On 3 Mar 2021, at 15:44, Amami Haruka <amami... at gmail.com> wrote:
> 
> I tried to continue the simulation with restart file with cp2k8.1. The first simulation starts from a PDB coordinate file and finished normally. 
> However, the new simulation gives Unknown element for KIND <HX1> error. when reading the restart file, even though no PDB file is being provided.
> The first simulation is run with the command cp2k.sopt monitor.inp > monitor.out.
> The second simulation is run with the command cp2k.sopt metaD.inp > metaD.out.
> The input and out files are attached.
> 
> -- 
> You received this message because you are subscribed to a topic in the Google Groups "cp2k" group.
> To unsubscribe from this topic, visit https://groups.google.com/d/topic/cp2k/qO954dGJaao/unsubscribe <https://groups.google.com/d/topic/cp2k/qO954dGJaao/unsubscribe>.
> To unsubscribe from this group and all its topics, send an email to cp... at googlegroups.com <mailto:cp... at googlegroups.com>.
> To view this discussion on the web visit https://groups.google.com/d/msgid/cp2k/6101a0a6-b1d4-421d-823b-9c8692d38c16n%40googlegroups.com <https://groups.google.com/d/msgid/cp2k/6101a0a6-b1d4-421d-823b-9c8692d38c16n%40googlegroups.com?utm_medium=email&utm_source=footer>.

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20210303/e96fde67/attachment.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: metaD.inp
Type: application/octet-stream
Size: 4293 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20210303/e96fde67/attachment.obj>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20210303/e96fde67/attachment-0001.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: metaD.out
Type: application/octet-stream
Size: 8745 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20210303/e96fde67/attachment-0001.obj>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20210303/e96fde67/attachment-0002.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: monitor.inp
Type: application/octet-stream
Size: 3168 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20210303/e96fde67/attachment-0002.obj>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20210303/e96fde67/attachment-0003.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: monitor.out
Type: application/octet-stream
Size: 87787 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20210303/e96fde67/attachment-0003.obj>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20210303/e96fde67/attachment-0004.htm>


More information about the CP2K-user mailing list