[CP2K-user] error (v. 8.2, windows)
brhr
iwao.... at gmail.com
Thu Jul 22 23:14:15 UTC 2021
"SIGSEGV: Segmentation fault - invalid memory reference" can be caused by
insufficient stack size.
The stack size of the binary was set to 4 MB as far as I remember.
This may be insufficient depending on the type of calculation.
This type of the error can be caused by various reasons in general.
I can't tell you the exact reason for the error from the provided
information.
When I ran, the calculation was a littele more proceeded than your result.
(I stopped halfway because of time constraints)
-------------------------------------------------------------------
DBCSR| CPU Multiplication driver
BLAS
DBCSR| Multrec recursion limit
512
DBCSR| Multiplication stack size
1000
DBCSR| Maximum elements for images
UNLIMITED
DBCSR| Multiplicative factor virtual images
1
DBCSR| Use multiplication densification
T
DBCSR| Multiplication size stacks
3
DBCSR| Use memory pool for CPU allocation
F
DBCSR| OMP: Current number of threads
6
DBCSR| OMP: Max number of threads
6
DBCSR| Split modifier for TAS multiplication algorithm
1.0E+00
**** **** ****** ** PROGRAM STARTED AT 2021-07-22
20:03:03.955
***** ** *** *** ** PROGRAM STARTED ON
DESKTOP-2FK7NUA
** **** ****** PROGRAM STARTED BY
brhr
***** ** ** ** ** PROGRAM PROCESS ID
134
**** ** ******* ** PROGRAM STARTED IN
/
CP2K| version string: CP2K
version 8.1
CP2K| source code revision number:
git:0b61f2f
CP2K| cp2kflags: omp libint fftw3 libxc pexsi quip spglib sirius libvori
libbqb
CP2K| is freely available from
https://www.cp2k.org/
CP2K| Program compiled at 08 Feb 2021
19:45:34
CP2K| Program compiled on
Lenovo-PC
CP2K| Program compiled for
Cygwin-i686-gfortran-FFTW3-LIBINT2-SIRIUS-PEXSI
CP2K| Data directory path
/home/user/cp2k-8.1/data
CP2K| Input file name
CP2K_diamond_2x2_DZVP-MOLOPT.inp
GLOBAL| Force Environment number
1
GLOBAL| Basis set file name
BASIS_MOLOPT
GLOBAL| Potential file name
GTH_POTENTIALS
GLOBAL| MM Potential file name
MM_POTENTIAL
GLOBAL| Coordinate file name
__STD_INPUT__
GLOBAL| Method name
CP2K
GLOBAL| Project name
diamond
GLOBAL| Preferred FFT library
FFTW3
GLOBAL| Preferred diagonalization lib.
SL
GLOBAL| Run type
ENERGY
GLOBAL| All-to-all communication in single precision
F
GLOBAL| FFTs using library dependent lengths
F
GLOBAL| Global print level
LOW
GLOBAL| MPI I/O enabled
T
GLOBAL| Total number of message passing processes
1
GLOBAL| Number of threads for this process
6
GLOBAL| This output is from process
0
GLOBAL| CPU model name Intel(R) Core(TM) i5-9400 CPU @
2.90GHz
MEMORY| system memory details [Kb]
MEMORY| rank 0 min max
average
MEMORY| MemTotal 8284068 8284068 8284068
8284068
MEMORY| MemFree 3546204 3546204 3546204
3546204
MEMORY| Buffers 0 0 0
0
MEMORY| Cached 0 0 0
0
MEMORY| Slab 0 0 0
0
MEMORY| SReclaimable 0 0 0
0
MEMORY| MemLikelyFree 3546204 3546204 3546204
3546204
GENERATE| Preliminary Number of Bonds generated:
0
GENERATE| Achieved consistency in connectivity generation.
*******************************************************************************
*******************************************************************************
**
**
** ##### ## ##
**
** ## ## ## ## ##
**
** ## ## ## ######
**
** ## ## ## ## ## ##### ## ## #### ## ##### #####
**
** ## ## ## ## ## ## ## ## ## ## ## ## ##
## **
** ## ## ## ## ## ## ## #### ### ## ###### ######
**
** ## ### ## ## ## ## ## ## ## ## ## ##
**
** ####### ##### ## ##### ## ## #### ## ##### ##
**
** ## ##
**
**
**
** ... make the atoms
dance **
**
**
** Copyright (C) by CP2K developers group (2000 - 2020)
**
** J. Chem. Phys. 152, 194103 (2020)
**
**
**
*******************************************************************************
TOTAL NUMBERS AND MAXIMUM NUMBERS
Total number of - Atomic kinds:
1
- Atoms:
64
- Shell sets:
64
- Shells:
320
- Primitive Cartesian functions:
448
- Cartesian basis functions:
896
- Spherical basis functions:
832
Maximum angular momentum of- Orbital basis functions:
2
- Local part of the GTH pseudopotential:
2
- Non-local part of the GTH pseudopotential:
0
SCF PARAMETERS Density guess:
ATOMIC
--------------------------------------------------------
max_scf:
100
max_scf_history:
0
max_diis:
4
--------------------------------------------------------
eps_scf:
1.00E-05
eps_scf_history:
0.00E+00
eps_diis:
1.00E-01
eps_eigval:
1.00E-05
--------------------------------------------------------
level_shift [a.u.]:
0.00
--------------------------------------------------------
Mixing method:
DIRECT_P_MIXING
--------------------------------------------------------
No outer SCF
Number of electrons:
256
Number of occupied orbitals:
128
Number of molecular orbitals:
128
Number of orbital functions:
832
Number of independent orbital functions:
832
Extrapolation method: initial_guess
SCF WAVEFUNCTION OPTIMIZATION
Step Update method Time Convergence Total energy
Change
------------------------------------------------------------------------------
---abort by Ctrl+C
>
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