[CP2K-user] [CP2K:14808] Scaling with xTB
fa...@gmail.com
fabia... at gmail.com
Mon Feb 22 10:44:24 UTC 2021
Dear Mauro,
This is consistent with my own observations of the scaling of xTB. Because
of the increasing cost of communication more CPUs don't necesarily speed up
the simulation. I don't use more than 25 CPUs with xTB unless I have well
above 1000 atoms.
Please note that the number of MPI ranks should be a square number. 25 CPUs
are probably faster than 28 unless you are using k-points.
Cheers,
Fabian
On Monday, 22 February 2021 at 11:10:11 UTC+1 chu... at gmail.com wrote:
> Hi Mauro,
>
> it will be easy to look into your scaling issue if you report time for
> each MD step. I am also doing MD with xTB.
>
> Regards
> Manjusha
>
>
> On Mon, Feb 22, 2021 at 10:59 AM Mauro Sgroi <mauro... at gmail.com>
> wrote:
>
>> Dear all,
>> I'm testing the xTB code on a liquid electrolyte containing a Li ion.
>> I'm running MD on a cell containing 728 atoms.
>> I obtain a disappointing scaling with the number of cores. The following
>> are times for 100 MD steps:
>>
>> cores Time (s)
>> 28 7818
>> 56 7364
>> 84 6529
>> 112 7493
>>
>> My input file can be downloaded here:
>>
>>
>> https://drive.google.com/file/d/1KvZz5x6FwgOP3dzH6fePghMQBineIlfE/view?usp=sharing
>>
>> Is this the right behaviour to be expected? Or is there is something
>> wrong in my compilation of the code or in the input file?
>> The HPC facility has a Infinband network protocol and a fast shared
>> filesystem.
>>
>> Thanks a lot in advance and best regards,
>> Mauro Sgroi.
>>
>>
>>
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