[CP2K-user] [CP2K:15211] the MD simulation of confined water and graphene
Matt W
mattwa... at gmail.com
Wed Apr 28 12:53:38 UTC 2021
There is also the bin size when calculating the averages. Using a bigger
bin will smooth the data over a larger volume (but you can lose resolution)
are the results you quote using a similar averaging procedure to you?
Personally, I'd be surprised if you get nice data from 10ps, but I'm not
doing this everyday anymore.
On Sunday, April 25, 2021 at 1:34:27 PM UTC+1 egbertchang wrote:
> however , in many researches, the authors take the same RUN time (10PS)t
> to analysis , their figure is soomth and stable , IS 10PS TOO short to
> get the perfect curve ?
> 在2021年4月23日星期五 UTC+8 下午7:53:44<tkuehne> 写道:
>
>> The qualitative trend looks reasonable. Regarding the large fluctuations
>> I was wondering
>> if you are also averaging over the full length of your graphene layer and
>> not just over a
>> small slice and over time. Wrt to the latter, 10 ps is a good start, but
>> still on the lower end.
>>
>> Best,
>> Thomas Kühne
>>
>> Am 23.04.2021 um 04:49 schrieb egbertchang <egb... at gmail.com>:
>>
>> but i RUN 30PS and take tha last 10PS to Analysis .
>>
>> 在2021年4月22日星期四 UTC+8 下午10:42:54<Matt W> 写道:
>>
>>> That's what I'd expect to see from a short simulation. Try running a
>>> classical version in your favourite software. You'll need 10s of ps minimum
>>> to get sensible statistics on the water density.
>>>
>>> On Thursday, April 22, 2021 at 2:25:12 PM UTC+1 egbertchang wrote:
>>>
>>>> Dear All
>>>>
>>>> I am trying to Run the simultion of graphene and confined water with
>>>> CP2K7.1, however I found the bulk water density is very unstable? Can
>>>> anyone look at this input file and tell me the reason? [image:
>>>> Graph2.jpg]
>>>>
>>>
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>>
>>
>>
>> ==============================
>> Thomas D. Kühne
>> Dynamics of Condensed Matter
>> Chair of Theoretical Chemistry
>> University of Paderborn
>> Warburger Str. 100
>> D-33098 Paderborn
>> Germany
>> td... at mail.upb.de
>> +49/(0)5251/60-5726 <+49%205251%20605726>
>>
>>
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