[CP2K-user] QMM energy conservation problem
Бранислав Миловановић
dr.bra... at gmail.com
Tue Nov 24 17:26:46 UTC 2020
Dear cp2k users/developers,
I'm trying to simulate guanine DNA guanine quadruplex using QMMM approach.
MM force field parameters are prepared with AmberTools20. QM part is
constituted of Na+ cation coordinated by 8 guanine molecules (so called
G-octet), while other nucleobases, counterions and solvating water
molecules are treated with MM.
System was previously equlibrated with NVT ensemble and MM approach with no
problem encountered. Also, when I try to run QM part of the system only
using same DFT settings as in the case of QMMM calculation I have no
problems.
However, when I try to run QMMM calculation under present setup (all input
files in the attachment) I constantly get shift of the Cons Qty during my
run, for both NVE and NVT runs (graphs from my last attempt are in the
attachment - last 500fs).
I tried different calculation setup (different timestep, ewald summation
parms etc.) by looking to the previous topics here in the group but with no
success.
Maybe there is something trivial bothering me here, qmmm link or similar...
I used IMOMM method for the link and also distributed charges across
neighbouring MM atoms to neutralize MM subsystem.
Can anybody help me with this?
Best,
Bane
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