[CP2K-user] [CP2K:13692] Re: error in compling CP2K using toolchain
zho...@gmail.com
zhongl... at gmail.com
Thu Jul 30 14:39:59 UTC 2020
Thank you for your suggesstion! The make.log and configure.log files are
attached below. This scalapack installation failure problem has bothered me
for several days, but I still haven't found a way to solve it. I need get
your help so that I can learn about the use of CP2K. Thanks!
在2020年7月30日星期四 UTC+8 下午3:56:37<tiz... at chem.uzh.ch> 写道:
> please post the complete build/scalapack-2.1.0/build/make.log (or the
> part where one can see the original compiler error for sgamx2d_.c).
>
> Best regards,
> Tiziano
>
> On 29.07.20 15:34, zho... at gmail.com wrote:
> > Thank you for your kind suggesstion!I checked the configure.log, but I
> > am still not sure what contributes to the error. I touched the
> > configure.log below, could you help me analyze it? Thanks!
> > 在2020年7月29日星期三 UTC+8 下午3:01:27<fa... at gmail.com> 写道:
> >
> > Hi,
> >
> > You have to check the appropriate log file to find the error:
> >
> > build/scalapack-2.1.0/build/configure.log
> >
> > Best,
> > Fabian
> >
> > On Wednesday, 29 July 2020 04:14:05 UTC+2, zho... at gmail.com wrote:
> >
> > Hi Everyone,
> > I meet a difficulty in compling CP2K using toolchain. Here is
> > the error in installing ScaLAPACK.
> > ==================== Installing ScaLAPACK ====================
> > scalapack-2.0.2.tgz is found
> > Installing from scratch into
> > /home/wangzl/cp2k-7.1.0/tools/toolchain/install/scalapack-2.0.2
> > ERROR: (./scripts/install_scalapack.sh, line 47) Non-zero exit
> > code detected.
> > and the error in make.log is following
> > make[2]: *** [CMakeFiles/scalapack.dir/build.make:661:
> > CMakeFiles/scalapack.dir/BLACS/SRC/sgamx2d_.c.o] Error 1
> > make[1]: *** [CMakeFiles/Makefile2:877:
> > CMakeFiles/scalapack.dir/all] Error 2
> > I tried to search sgamx2d_.c.o in
> > CMakeFiles/scalapack.dir/BLACS/SRC but fail to find. I am
> > puzzling now. Can anyone help me? Thanks!
> >
> > --
> > You received this message because you are subscribed to the Google
> > Groups "cp2k" group.
> > To unsubscribe from this group and stop receiving emails from it, send
> > an email to cp... at googlegroups.com
> > <mailto:cp... at googlegroups.com>.
> > To view this discussion on the web visit
> >
> https://groups.google.com/d/msgid/cp2k/a49aa622-01a8-473b-bcb9-3df62a079e24n%40googlegroups.com
> > <
> https://groups.google.com/d/msgid/cp2k/a49aa622-01a8-473b-bcb9-3df62a079e24n%40googlegroups.com?utm_medium=email&utm_source=footer
> >.
>
> --
> Tiziano Müller
> University of Zurich
> Department of Chemistry
> Winterthurerstrasse 190
> CH-8057 Zürich
>
> Tel: +41 44 63 54234
> www.chem.uzh.ch
> tiz... at chem.uzh.ch
>
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In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgsum2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgsum2d_.c: In function ‘cgsum2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:291:9: warning: implicit declaration of function ‘BI_smvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
291 | BI_smvcopy(2*(m), (n), (float *) (A), 2*(lda), (float *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgsum2d_.c:154:7: note: in expansion of macro ‘BI_cmvcopy’
154 | BI_cmvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:293:9: warning: implicit declaration of function ‘BI_svmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
293 | BI_svmcopy(2*(m), (n), (float *) (A), 2*(lda), (float *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgsum2d_.c:169:6: note: in expansion of macro ‘BI_cvmcopy’
169 | BI_cvmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamx2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamx2d_.c: In function ‘zgamx2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:295:9: warning: implicit declaration of function ‘BI_dmvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
295 | BI_dmvcopy(2*(m), (n), (double *) (A), 2*(lda), (double *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamx2d_.c:202:7: note: in expansion of macro ‘BI_zmvcopy’
202 | BI_zmvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamx2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamx2d_.c:224:12: error: expected expression before ‘_Static_assert’
224 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamx2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:297:9: warning: implicit declaration of function ‘BI_dvmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
297 | BI_dvmcopy(2*(m), (n), (double *) (A), 2*(lda), (double *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamx2d_.c:281:6: note: in expansion of macro ‘BI_zvmcopy’
281 | BI_zvmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgsum2d_.c: In function ‘dgsum2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgsum2d_.c:154:7: warning: implicit declaration of function ‘BI_dmvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
154 | BI_dmvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
| BI_zmvcopy
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgsum2d_.c:167:6: warning: implicit declaration of function ‘BI_dvmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
167 | BI_dvmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
| BI_cvmcopy
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamx2d_.c:283:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
283 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
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make[2]: *** [CMakeFiles/scalapack.dir/build.make:700: CMakeFiles/scalapack.dir/BLACS/SRC/zgamx2d_.c.o] Error 1
make[2]: *** Waiting for unfinished jobs....
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamx2d_.c: In function ‘dgamx2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamx2d_.c:202:7: warning: implicit declaration of function ‘BI_dmvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
202 | BI_dmvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
| BI_zmvcopy
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamx2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamx2d_.c:224:12: error: expected expression before ‘_Static_assert’
224 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
[ 3%] Building C object CMakeFiles/scalapack.dir/BLACS/SRC/sgesd2d_-C.c.o
[ 3%] Building C object CMakeFiles/scalapack.dir/BLACS/SRC/igesd2d_-C.c.o
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamx2d_.c:281:6: warning: implicit declaration of function ‘BI_dvmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
281 | BI_dvmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
| BI_cvmcopy
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamn2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamn2d_.c: In function ‘cgamn2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:291:9: warning: implicit declaration of function ‘BI_smvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
291 | BI_smvcopy(2*(m), (n), (float *) (A), 2*(lda), (float *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamn2d_.c:202:7: note: in expansion of macro ‘BI_cmvcopy’
202 | BI_cmvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamn2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamn2d_.c:224:12: error: expected expression before ‘_Static_assert’
224 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamn2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:293:9: warning: implicit declaration of function ‘BI_svmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
293 | BI_svmcopy(2*(m), (n), (float *) (A), 2*(lda), (float *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamn2d_.c:281:6: note: in expansion of macro ‘BI_cvmcopy’
281 | BI_cvmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamx2d_.c:283:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
283 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamn2d_.c:283:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
283 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igsum2d_.c: In function ‘igsum2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igsum2d_.c:153:7: warning: implicit declaration of function ‘BI_imvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
153 | BI_imvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
| BI_zmvcopy
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igsum2d_.c:166:6: warning: implicit declaration of function ‘BI_ivmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
166 | BI_ivmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
| BI_cvmcopy
make[2]: *** [CMakeFiles/scalapack.dir/build.make:674: CMakeFiles/scalapack.dir/BLACS/SRC/dgamx2d_.c.o] Error 1
make[2]: *** [CMakeFiles/scalapack.dir/build.make:752: CMakeFiles/scalapack.dir/BLACS/SRC/cgamn2d_.c.o] Error 1
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/blacs_get_.c: In function ‘blacs_get_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/blacs_get_.c:16:34: warning: implicit declaration of function ‘Cblacs_pinfo’ [-Wimplicit-function-declaration]
16 | if (BI_COMM_WORLD == NULL) Cblacs_pinfo(val, &ierr);
| ^~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/blacs_get_.c:26:7: warning: ‘MPI_Attr_get’ is deprecated: MPI_Attr_get was deprecated in MPI-2.0; use MPI_Comm_get_attr instead [-Wdeprecated-declarations]
26 | ierr=MPI_Attr_get(MPI_COMM_WORLD, MPI_TAG_UB, (BVOID **) &iptr,val);
| ^~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/blacs_get_.c:1:
/usr/local/include/mpi.h:2701:20: note: declared here
2701 | OMPI_DECLSPEC int MPI_Attr_get(MPI_Comm comm, int keyval, void *attribute_val, int *flag)
| ^~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgsum2d_.c: In function ‘sgsum2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgsum2d_.c:154:7: warning: implicit declaration of function ‘BI_smvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
154 | BI_smvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
| BI_zmvcopy
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgsum2d_.c:167:6: warning: implicit declaration of function ‘BI_svmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
167 | BI_svmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
| BI_cvmcopy
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgsum2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgsum2d_.c: In function ‘zgsum2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:295:9: warning: implicit declaration of function ‘BI_dmvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
295 | BI_dmvcopy(2*(m), (n), (double *) (A), 2*(lda), (double *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgsum2d_.c:156:7: note: in expansion of macro ‘BI_zmvcopy’
156 | BI_zmvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:297:9: warning: implicit declaration of function ‘BI_dvmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
297 | BI_dvmcopy(2*(m), (n), (double *) (A), 2*(lda), (double *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgsum2d_.c:171:6: note: in expansion of macro ‘BI_zvmcopy’
171 | BI_zvmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamx2d_.c: In function ‘igamx2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamx2d_.c: In function ‘sgamx2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamx2d_.c:199:7: warning: implicit declaration of function ‘BI_imvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
199 | BI_imvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
| BI_zmvcopy
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamx2d_.c:202:7: warning: implicit declaration of function ‘BI_smvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
202 | BI_smvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
| BI_zmvcopy
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamx2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamx2d_.c:221:12: error: expected expression before ‘_Static_assert’
221 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamx2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamx2d_.c:224:12: error: expected expression before ‘_Static_assert’
224 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamx2d_.c:278:6: warning: implicit declaration of function ‘BI_ivmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
278 | BI_ivmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
| BI_cvmcopy
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamx2d_.c:281:6: warning: implicit declaration of function ‘BI_svmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
281 | BI_svmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
| BI_cvmcopy
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamx2d_.c:280:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
280 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamx2d_.c:283:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
283 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
make[2]: *** [CMakeFiles/scalapack.dir/build.make:661: CMakeFiles/scalapack.dir/BLACS/SRC/sgamx2d_.c.o] Error 1
make[2]: *** [CMakeFiles/scalapack.dir/build.make:648: CMakeFiles/scalapack.dir/BLACS/SRC/igamx2d_.c.o] Error 1
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamx2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamx2d_.c: In function ‘cgamx2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:291:9: warning: implicit declaration of function ‘BI_smvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
291 | BI_smvcopy(2*(m), (n), (float *) (A), 2*(lda), (float *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamx2d_.c:202:7: note: in expansion of macro ‘BI_cmvcopy’
202 | BI_cmvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamn2d_.c: In function ‘igamn2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamn2d_.c:199:7: warning: implicit declaration of function ‘BI_imvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
199 | BI_imvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
| BI_zmvcopy
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamx2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamx2d_.c:224:12: error: expected expression before ‘_Static_assert’
224 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamn2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamn2d_.c:221:12: error: expected expression before ‘_Static_assert’
221 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamn2d_.c:278:6: warning: implicit declaration of function ‘BI_ivmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
278 | BI_ivmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
| BI_cvmcopy
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamx2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:293:9: warning: implicit declaration of function ‘BI_svmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
293 | BI_svmcopy(2*(m), (n), (float *) (A), 2*(lda), (float *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamx2d_.c:281:6: note: in expansion of macro ‘BI_cvmcopy’
281 | BI_cvmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamn2d_.c: In function ‘dgamn2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamn2d_.c:202:7: warning: implicit declaration of function ‘BI_dmvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
202 | BI_dmvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
| BI_zmvcopy
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/igamn2d_.c:280:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
280 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamn2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamn2d_.c:224:12: error: expected expression before ‘_Static_assert’
224 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/cgamx2d_.c:283:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
283 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamn2d_.c:281:6: warning: implicit declaration of function ‘BI_dvmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
281 | BI_dvmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
| BI_cvmcopy
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamn2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamn2d_.c: In function ‘zgamn2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:295:9: warning: implicit declaration of function ‘BI_dmvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
295 | BI_dmvcopy(2*(m), (n), (double *) (A), 2*(lda), (double *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamn2d_.c:202:7: note: in expansion of macro ‘BI_zmvcopy’
202 | BI_zmvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamn2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamn2d_.c:224:12: error: expected expression before ‘_Static_assert’
224 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/dgamn2d_.c:283:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
283 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamn2d_.c: In function ‘sgamn2d_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamn2d_.c:202:7: warning: implicit declaration of function ‘BI_smvcopy’; did you mean ‘BI_zmvcopy’? [-Wimplicit-function-declaration]
202 | BI_smvcopy(Mpval(m), Mpval(n), A, tlda, bp->Buff);
| ^~~~~~~~~~
| BI_zmvcopy
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bconfig.h:16,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:7,
from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamn2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamn2d_.c:224:12: error: expected expression before ‘_Static_assert’
224 | ierr=MPI_Type_struct(i, len, disp, dtypes, &MyType);
| ^~~~~~~~~~~~~~~
In file included from /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamn2d_.c:1:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/Bdef.h:297:9: warning: implicit declaration of function ‘BI_dvmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
297 | BI_dvmcopy(2*(m), (n), (double *) (A), 2*(lda), (double *) (buff))
| ^~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamn2d_.c:281:6: note: in expansion of macro ‘BI_zvmcopy’
281 | BI_zvmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
make[2]: *** [CMakeFiles/scalapack.dir/build.make:713: CMakeFiles/scalapack.dir/BLACS/SRC/igamn2d_.c.o] Error 1
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamn2d_.c:281:6: warning: implicit declaration of function ‘BI_svmcopy’; did you mean ‘BI_cvmcopy’? [-Wimplicit-function-declaration]
281 | BI_svmcopy(Mpval(m), Mpval(n), A, tlda, bp2->Buff);
| ^~~~~~~~~~
| BI_cvmcopy
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/zgamn2d_.c:283:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
283 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/sgamn2d_.c:283:16: warning: implicit declaration of function ‘BI_TransDist’ [-Wimplicit-function-declaration]
283 | BI_TransDist(ctxt, tscope, Mpval(m), Mpval(n), rA, cA, tldia,
| ^~~~~~~~~~~~
make[2]: *** [CMakeFiles/scalapack.dir/build.make:687: CMakeFiles/scalapack.dir/BLACS/SRC/cgamx2d_.c.o] Error 1
make[2]: *** [CMakeFiles/scalapack.dir/build.make:739: CMakeFiles/scalapack.dir/BLACS/SRC/dgamn2d_.c.o] Error 1
make[2]: *** [CMakeFiles/scalapack.dir/build.make:765: CMakeFiles/scalapack.dir/BLACS/SRC/zgamn2d_.c.o] Error 1
make[2]: *** [CMakeFiles/scalapack.dir/build.make:726: CMakeFiles/scalapack.dir/BLACS/SRC/sgamn2d_.c.o] Error 1
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/blacs_init_.c: In function ‘blacs_gridinit_’:
/home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/BLACS/SRC/blacs_init_.c:35:4: warning: implicit declaration of function ‘blacs_gridmap_’; did you mean ‘Cblacs_gridmap’? [-Wimplicit-function-declaration]
35 | blacs_gridmap_(ConTxt, tmpgrid, nprow, nprow, npcol);
| ^~~~~~~~~~~~~~
| Cblacs_gridmap
make[1]: *** [CMakeFiles/Makefile2:877: CMakeFiles/scalapack.dir/all] Error 2
make: *** [Makefile:163: all] Error 2
-------------- next part --------------
-- The C compiler identification is GNU 9.3.0
-- The Fortran compiler identification is GNU 9.3.0
-- Check for working C compiler: /usr/bin/gcc
-- Check for working C compiler: /usr/bin/gcc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Detecting C compile features
-- Detecting C compile features - done
-- Check for working Fortran compiler: /usr/bin/gfortran
-- Check for working Fortran compiler: /usr/bin/gfortran -- works
-- Detecting Fortran compiler ABI info
-- Detecting Fortran compiler ABI info - done
-- Checking whether /usr/bin/gfortran supports Fortran 90
-- Checking whether /usr/bin/gfortran supports Fortran 90 -- yes
-- Found MPI_C: /usr/local/lib/libmpi.so (found version "3.1")
-- Found MPI_Fortran: /usr/local/lib/libmpi_usempif08.so (found version "3.1")
-- Found MPI: TRUE (found version "3.1")
-- Found MPI_LIBRARY : TRUE
-- --> MPI C Compiler : /usr/local/bin/mpicc
-- --> C Compiler : /usr/local/bin/mpicc
-- --> MPI Fortran Compiler : /usr/local/bin/mpif90
-- --> Fortran Compiler : /usr/local/bin/mpif90
-- Reducing RELEASE optimization level to O2
-- =========
-- Compiling and Building BLACS INSTALL Testing to set correct variables
-- Configure in the INSTALL directory successful
-- Build in the BLACS INSTALL directory successful
-- =========
-- Testing FORTRAN_MANGLING
-- CDEFS set to Add_
-- =========
-- CHECKING BLAS AND LAPACK LIBRARIES
-- --> Searching for optimized LAPACK and BLAS libraries on your machine.
-- Looking for Fortran sgemm
-- Looking for Fortran sgemm - not found
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed
-- Looking for pthread_create in pthreads
-- Looking for pthread_create in pthreads - not found
-- Looking for pthread_create in pthread
-- Looking for pthread_create in pthread - found
-- Found Threads: TRUE
-- Looking for Fortran sgemm
-- Looking for Fortran sgemm - found
-- Found BLAS: /home/wangzl/cp2k-7.1/tools/toolchain/install/openblas-0.3.6/lib/libopenblas.so
-- Looking for Fortran cheev
-- Looking for Fortran cheev - found
-- A library with LAPACK API found.
-- BLAS library: /home/wangzl/cp2k-7.1/tools/toolchain/install/openblas-0.3.6/lib/libopenblas.so
-- LAPACK library: /home/wangzl/cp2k-7.1/tools/toolchain/install/openblas-0.3.6/lib/libopenblas.so
-- =========
-- Configuring done
-- Generating done
CMake Warning:
Manually-specified variables were not used by the project:
CMAKE_INSTALL_LIBDIR
-- Build files have been written to: /home/wangzl/cp2k-7.1/tools/toolchain/build/scalapack-2.0.2/build
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