[CP2K-user] Error in Travis
Akshay Malik
akshayma... at gmail.com
Tue May 21 06:36:54 UTC 2019
Hello everyone,
I am interested in getting Raman spectra of adsorbed molecules.
As an exercise, I am following one of the HOWTOs on the cp2k web: "How to
calculate infrared and Raman spectra from MD
<http://www.travis-analyzer.de/files/travis_ir_raman.pdf> with CP2K and
TRAVIS <http://www.travis-analyzer.de/>". In my case, I am simulating a
molecule of methanol the same as given in the tutorial.
At the time of writing, I have made the first Molecular Dynamics run and
have obtained the infrared spectrum and a cp2k input file for the
calculation of the polarizabilities by using TRAVIS and I also calculated
polarizabilities but I am getting an error in the second run.
Error is
>>> Initialization >>>
Initializing Raman Observation 1...
Polarizability cache: Trying to allocate 881.02 KiB of memory...
Initializing Raman Observation 2...
Polarizability cache: Trying to allocate 881.02 KiB of memory...
<<< End of Initialization <<<
### Starting Main Analysis ###
Hint: Press CTRL+C once to softly interrupt analysis and still write the
results.
Creating an empty file named EXIT ("touch EXIT") has the same effect.
Step 0 ....................................processRaman(): Error while
reading trajectory for polarizabilities.
*** SIGABRT caught: Abnormal program termination ***
TRAVIS had to abort execution.
Hopefully, the reason was printed above this message.
Decoding line numbers... ("addr2line <addr> -f -i -C -e
/home/chemistry/phd/cyz188194/bin/travis")
# 10 - [ 0x41acc3] - DumpLinuxBacktrace() - backtrace.cpp:90
# 9 - [ 0x41b552] - CrashAbort() - backtrace.cpp:217
# 5 - [ 0x581d0d] - processRaman(CTimeStep*) - raman.cpp:2576
# 4 - [ 0x4e4300] - Interface_ProcessStep(CTimeStep*) -
interface.cpp:208
# 3 - [ 0x62651e] - main - travis.cpp:3931
# 1 - [ 0x403bf9] - _start - ??:0
Delivering control to operating system.
Aborted (core dumped)
I have hereby attached the polarizabilities trajectory.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20190521/dfa07970/attachment.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: polarizability_wannier.xyz
Type: chemical/x-xyz
Size: 31410 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20190521/dfa07970/attachment.xyz>
More information about the CP2K-user
mailing list