[CP2K-user] Convergence problem- MD calculation for metal surface
Amin
amin.ja... at gmail.com
Sun Mar 31 22:27:50 UTC 2019
Dear all,
I'm encountering convergence problem for the MD simulation of single
molecule adsorption on Ni surface. This is a test case to see if I can
calculate my desired system. I'm using a GLE thermostat.
I've tried using DFTB and PM6 but in both cases I receive the error below,
mentioning:
*"Bad condition number R_COND = 0.000E+00 (smaller than the machine working
precision" common/mathlib.F:709.*
As you know, DFTB or PM6 are chosen because of their inexpensiveness!
[image: Capture.PNG]
Here is my input file and I've attached the coordinate file:
&GLOBAL
PROJECT CH4-Ni
RUN_TYPE MD
PRINT_LEVEL LOW
&END GLOBAL
&FORCE_EVAL
METHOD Quickstep
&DFT
&QS
METHOD PM6
&SE
RC_INTERACTION [angstrom] 8.0
RC_COULOMB [angstrom] 8.0
RC_RANGE [angstrom] 0.05
&END
&END QS
! &QS
! METHOD DFTB
! &DFTB
! SELF_CONSISTENT T
! DO_EWALD T
! DISPERSION T
! &PARAMETER
! PARAM_FILE_PATH /data/scc
! PARAM_FILE_NAME scc_parameter
! UFF_FORCE_FIELD uff_table
! &END PARAMETER
! &END DFTB
! &END QS
&SCF
MAX_SCF 30
EPS_SCF 5.0E-6
&OUTER_SCF
MAX_SCF 30
EPS_SCF 5.0E-6
&END
&DIAGONALIZATION ON
ALGORITHM STANDARD
&END DIAGONALIZATION
ADDED_MOS 300
&SMEAR ON
METHOD FERMI_DIRAC
ELECTRONIC_TEMPERATURE [K] 350
&END SMEAR
&MIXING
METHOD BROYDEN_MIXING
BETA 1.5
ALPHA 0.1
NBROYDEN 8
&END MIXING
&PRINT
&RESTART LOW
BACKUP_COPIES 1
&END RESTART
&END PRINT
SCF_GUESS ATOMIC
&END SCF
&POISSON
POISSON_SOLVER MT
PERIODIC XY
&EWALD
EWALD_TYPE SPME
GMAX 25
O_SPLINE 5
&END EWALD
&END POISSON
&END DFT
&SUBSYS
&CELL
ABC 12.4597 12.9485 23.1387
PERIODIC XY
&END CELL
&COORD
@INCLUDE 'ch4-ni.coord'
&END COORD
&TOPOLOGY
&CENTER_COORDINATES
&END CENTER_COORDINATES
&END TOPOLOGY
&END SUBSYS
&END FORCE_EVAL
&MOTION
&MD
ENSEMBLE NVT
STEPS 10000
TIMESTEP 0.5
TEMPERATURE 300
&THERMOSTAT
REGION MASSIVE
TYPE GLE
&GLE
NDIM 3
A_SCALE [ps^-1] 1.00
A_LIST 2.000000000000e+0
1.365763041717e+1 0.000000000000e+0
A_LIST -1.365763041717e+1
9.418257899376e-1 5.860040064992e+2
A_LIST 0.000000000000e+0
-5.860040064992e+2 0.000000000000e+0
C_LIST 3.071856358605e+2
1.052252204958e+0 -3.083120039764e+2
C_LIST 1.052252204958e+0
1.353606645969e+4 0.000000000000e+0
C_LIST -3.083120039764e+2
0.000000000000e+0 1.352888082383e+4
&END GLE
&END THERMOSTAT
&PRINT
&ENERGY
&EACH
MD 10
&END EACH
&END ENERGY
&END PRINT
&END MD
&FREE_ENERGY
&FREE_ENERGY_INFO
&EACH
MD 1000
&END
&END
&METADYN
&PRINT
&COLVAR
COMMON_ITERATION_LEVELS 3
&EACH
MD 1
&END
&END
&HILLS
COMMON_ITERATION_LEVELS 3
&EACH
MD 1
&END
&END
&END
&END METADYN
&END FREE_ENERGY
&PRINT
&TRAJECTORY
FORMAT XYZ
&EACH
MD 20
&END EACH
&END TRAJECTORY
&RESTART_HISTORY
&EACH
MD 10000
&END EACH
&END RESTART_HISTORY
&RESTART OFF
&END RESTART
&END PRINT
&END MOTION
I would be grateful if anyone could take a look to my input file and let me
know about the possible way to get the structure converged. I've already
relaxed the metal structure before using it for md simulation.
Thanks in advance.
Amin
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20190331/08a1b258/attachment.htm>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: ch4-ni.coord
Type: application/octet-stream
Size: 6000 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20190331/08a1b258/attachment.obj>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: Capture.PNG
Type: image/png
Size: 26653 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20190331/08a1b258/attachment.png>
More information about the CP2K-user
mailing list