[CP2K-user] Compilation error

Mozhdeh Mohammadpour mozhdehmo... at gmail.com
Wed Apr 17 18:19:38 UTC 2019


Dear cp2k users and developers,
I  have got an error while compilation
Any suggest?
Below is the error description
Thanks in advance



    USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration
          1
Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because
it was created by a different version of GNU Fortran
compilation terminated.
/home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target
'dbcsr_machine.o' failed
make[4]: *** [dbcsr_machine.o] Error 1
/home/mozhdeh/cp2k/tools/build_utils/fypp -n --line-marker-format=gfortran5
/home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F dbcsr_machine.F90
Makefile:135: recipe for target 'libdbcsr' failed
make[3]: *** [libdbcsr] Error 2
/home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed
make[2]: *** [dbcsr] Error 2
make[2]: *** Waiting for unfinished jobs....
/home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10:

       USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration
          1
Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because
it was created by a different version of GNU Fortran
compilation terminated.
/home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target
'dbcsr_machine.o' failed
make[4]: *** [dbcsr_machine.o] Error 1
Makefile:135: recipe for target 'libdbcsr' failed
make[3]: *** [libdbcsr] Error 2
/home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed
make[2]: *** [dbcsr] Error 2
make[2]: *** Waiting for unfinished jobs....
/home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10:

       USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration
          1
Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because
it was created by a different version of GNU Fortran
compilation terminated.
/home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target
'dbcsr_machine.o' failed
make[4]: *** [dbcsr_machine.o] Error 1
Makefile:135: recipe for target 'libdbcsr' failed
make[3]: *** [libdbcsr] Error 2
/home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed
make[2]: *** [dbcsr] Error 2
make[2]: *** Waiting for unfinished jobs....
/home/mozhdeh/cp2k/tools/build_utils/fypp -n --line-marker-format=gfortran5
/home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F dbcsr_machine.F90
/home/mozhdeh/cp2k/tools/toolchain/install/gcc-8.3.0/bin/gfortran -c
-march=native -fno-omit-frame-pointer -g  -O3 -funroll-loops
-I'/home/mozhdeh/cp2k/tools/toolchain/install/openblas-0.3.5/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/fftw-3.3.8/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libint-1.1.6/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libxc-4.3.4/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libxsmm-1.10.0/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/gsl-2.5/include'
-I/home/mozhdeh/cp2k/tools/toolchain/install/spglib-1.12.2/include
-I/home/mozhdeh/cp2k/tools/toolchain/install/hdf5-1.10.4/include
-I'/home/mozhdeh/cp2k/tools/toolchain/install/json_fortran-7.0.0/include'
-ffree-form -std=f2008 -fimplicit-none  -Werror=aliasing -Werror=ampersand
-Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intrinsics-std
-Werror=line-truncation -Werror=tabs -Werror=target-lifetime
-Werror=underflow -Werror=unused-but-set-variable -Werror=unused-variable
-Werror=unused-dummy-argument -Werror=conversion -Werror=zerotrip
-Werror=uninitialized -Wno-maybe-uninitialized -Wuse-without-only
-D__LIBXSMM   -D__FFTW3  -D__LIBINT -D__LIBINT_MAX_AM=6
-D__LIBDERIV_MAX_AM1=5 -D__LIBXC -D__HAS_smm_dnn    -D__SPGLIB
-D__JSON   -D__SHORT_FILE__="\"dbcsr_machine_internal.F\""
-I'/home/mozhdeh/cp2k/exts/dbcsr/src/base/'
-I'/home/mozhdeh/cp2k/exts/dbcsr/src'
dbcsr_machine_internal.F90
mpif90 -c -march=native -fno-omit-frame-pointer -g  -O3 -funroll-loops
-fopenmp -I'/home/mozhdeh/cp2k/tools/toolchain/install/openmpi-3.1.3/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/openblas-0.3.5/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/fftw-3.3.8/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libint-1.1.6/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libxc-4.3.4/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libxsmm-1.10.0/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/elpa-2017.
05.003/include/elpa_openmp-2017.05.003/modules' -I'/home/mozhdeh/cp2k/tools/
toolchain/install/elpa-2017.05.003/include/elpa_openmp-2017.05.003/elpa'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/gsl-2.5/include'
-I/home/mozhdeh/cp2k/tools/toolchain/install/spglib-1.12.2/include
-I/home/mozhdeh/cp2k/tools/toolchain/install/hdf5-1.10.4/include
-I/home/mozhdeh/cp2k/tools/toolchain/install/libvdwxc-master-
429a80027a2ec2c97e2f6d9a3dc84843f2739865/include -I/home/mozhdeh/cp2k/tools/
toolchain/install/sirius-6.1.2/include -I'/home/mozhdeh/cp2k/tools/
toolchain/install/json_fortran-7.0.0/include' -ffree-form -std=f2008
-fimplicit-none  -Werror=aliasing -Werror=ampersand -Werror=c-binding-type
-Werror=intrinsic-shadow -Werror=intrinsics-std -Werror=line-truncation
-Werror=tabs -Werror=target-lifetime -Werror=underflow
-Werror=unused-but-set-variable -Werror=unused-variable
-Werror=unused-dummy-argument -Werror=conversion -Werror=zerotrip
-Werror=uninitialized -Wno-maybe-uninitialized -Wuse-without-only
-D__LIBXSMM  -D__parallel  -D__FFTW3  -D__LIBINT -D__LIBINT_MAX_AM=6
-D__LIBDERIV_MAX_AM1=5 -D__LIBXC -D__HAS_smm_dnn -D__SCALAPACK
-D__ELPA=201705 -D__GSL -D__SPGLIB -D__HDF5 -D__LIBVDWXC -D__SIRIUS
-D__JSON   -D__SHORT_FILE__="\"dbcsr_machine.F\""
-I'/home/mozhdeh/cp2k/exts/dbcsr/src/base/'
-I'/home/mozhdeh/cp2k/exts/dbcsr/src'
dbcsr_machine.F90
/home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10:

       USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration
          1
Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because
it was created by a different version of GNU Fortran
compilation terminated.
/home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target
'dbcsr_machine.o' failed
make[4]: *** [dbcsr_machine.o] Error 1
Makefile:135: recipe for target 'libdbcsr' failed
make[3]: *** [libdbcsr] Error 2
/home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed
make[2]: *** [dbcsr] Error 2
make[2]: *** Waiting for unfinished jobs....
/home/mozhdeh/cp2k/tools/toolchain/install/gcc-8.3.0/bin/gfortran -c
-march=native -fno-omit-frame-pointer -g  -O3 -funroll-loops  -fopenmp
-I'/home/mozhdeh/cp2k/tools/toolchain/install/openblas-0.3.5/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/fftw-3.3.8/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libint-1.1.6/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libxc-4.3.4/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libxsmm-1.10.0/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/gsl-2.5/include'
-I/home/mozhdeh/cp2k/tools/toolchain/install/spglib-1.12.2/include
-I/home/mozhdeh/cp2k/tools/toolchain/install/hdf5-1.10.4/include
-I'/home/mozhdeh/cp2k/tools/toolchain/install/json_fortran-7.0.0/include'
-ffree-form -std=f2008 -fimplicit-none  -Werror=aliasing -Werror=ampersand
-Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intrinsics-std
-Werror=line-truncation -Werror=tabs -Werror=target-lifetime
-Werror=underflow -Werror=unused-but-set-variable -Werror=unused-variable
-Werror=unused-dummy-argument -Werror=conversion -Werror=zerotrip
-Werror=uninitialized -Wno-maybe-uninitialized -Wuse-without-only
-D__LIBXSMM   -D__FFTW3  -D__LIBINT -D__LIBINT_MAX_AM=6
-D__LIBDERIV_MAX_AM1=5 -D__LIBXC -D__HAS_smm_dnn    -D__SPGLIB
-D__JSON   -D__SHORT_FILE__="\"dbcsr_machine.F\""
-I'/home/mozhdeh/cp2k/exts/dbcsr/src/base/'
-I'/home/mozhdeh/cp2k/exts/dbcsr/src'
dbcsr_machine.F90
/home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10:

       USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration
          1
Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because
it was created by a different version of GNU Fortran
compilation terminated.
/home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target
'dbcsr_machine.o' failed
make[4]: *** [dbcsr_machine.o] Error 1
Makefile:135: recipe for target 'libdbcsr' failed
make[3]: *** [libdbcsr] Error 2
/home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed
make[2]: *** [dbcsr] Error 2
make[2]: *** Waiting for unfinished jobs....
/home/mozhdeh/cp2k/tools/build_utils/fypp -n --line-marker-format=gfortran5
/home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F dbcsr_machine.F90
/home/mozhdeh/cp2k/tools/toolchain/install/gcc-8.3.0/bin/gfortran -c
-march=native -fno-omit-frame-pointer -g  -O3 -funroll-loops
-I'/home/mozhdeh/cp2k/tools/toolchain/install/openblas-0.3.5/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/fftw-3.3.8/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libint-1.1.6/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libxc-4.3.4/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/libxsmm-1.10.0/include'
-I'/home/mozhdeh/cp2k/tools/toolchain/install/gsl-2.5/include'
-I/home/mozhdeh/cp2k/tools/toolchain/install/spglib-1.12.2/include
-I/home/mozhdeh/cp2k/tools/toolchain/install/hdf5-1.10.4/include
-I'/home/mozhdeh/cp2k/tools/toolchain/install/json_fortran-7.0.0/include'
-ffree-form -std=f2008 -fimplicit-none  -Werror=aliasing -Werror=ampersand
-Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intrinsics-std
-Werror=line-truncation -Werror=tabs -Werror=target-lifetime
-Werror=underflow -Werror=unused-but-set-variable -Werror=unused-variable
-Werror=unused-dummy-argument -Werror=conversion -Werror=zerotrip
-Werror=uninitialized -Wno-maybe-uninitialized -Wuse-without-only
-D__LIBXSMM   -D__FFTW3  -D__LIBINT -D__LIBINT_MAX_AM=6
-D__LIBDERIV_MAX_AM1=5 -D__LIBXC -D__HAS_smm_dnn    -D__SPGLIB
-D__JSON   -D__SHORT_FILE__="\"dbcsr_machine.F\""
-I'/home/mozhdeh/cp2k/exts/dbcsr/src/base/'
-I'/home/mozhdeh/cp2k/exts/dbcsr/src'
dbcsr_machine.F90
/home/mozhdeh/cp2k/exts/dbcsr/src/base/dbcsr_machine.F:77:10:

       USE libxsmm, ONLY: libxsmm_timer_tick, libxsmm_timer_duration
          1
Fatal Error: Cannot read module file ‘libxsmm.mod’ opened at (1), because
it was created by a different version of GNU Fortran
compilation terminated.
/home/mozhdeh/cp2k/exts/dbcsr/Makefile:484: recipe for target
'dbcsr_machine.o' failed
make[4]: *** [dbcsr_machine.o] Error 1
Makefile:135: recipe for target 'libdbcsr' failed
make[3]: *** [libdbcsr] Error 2
/home/mozhdeh/cp2k/exts/Makefile.inc:16: recipe for target 'dbcsr' failed
make[2]: *** [dbcsr] Error 2
make[2]: *** Waiting for unfinished jobs....
/home/mozhdeh/cp2k/Makefile:120: recipe for target 'ssmp' failed
make[1]: *** [ssmp] Error 2
make[1]: *** Waiting for unfinished jobs....
/home/mozhdeh/cp2k/Makefile:120: recipe for target 'sopt' failed
make[1]: *** [sopt] Error 2
/home/mozhdeh/cp2k/Makefile:120: recipe for target 'popt' failed
make[1]: *** [popt] Error 2
/home/mozhdeh/cp2k/Makefile:120: recipe for target 'psmp' failed
make[1]: *** [psmp] Error 2
/home/mozhdeh/cp2k/Makefile:120: recipe for target 'pdbg' failed
make[1]: *** [pdbg] Error 2
/home/mozhdeh/cp2k/Makefile:120: recipe for target 'sdbg' failed
make[1]: *** [sdbg] Error 2
Makefile:115: recipe for target 'all' failed
make: *** [all] Error 2

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