[CP2K-user] How to set constant speed of atoms with constrain?
yghua... at gmail.com
yghua... at gmail.com
Sat Oct 13 13:28:03 UTC 2018
Hi, everyone:
I am trying to simulate the transportation of atom through a membrane, in
which the *scalar *speed (mode of velocity) should be set as constant.
But I really do not know how to set this constant speed condition in CP2K.
If you have any idea, please give me a hand. Many thanks!
If this is difficult, I should also try the second best as set the Velocity
in a direction as constant.
I am wondering whether I can constrain the the distance of the atom to a
fixed point to be increased at specific value in each time step?
In the following example, I *set a constrain *on the distance in the x
direction from No.409 atom to the fixed point at (4, 7, 7) to *increase
0.01 Angstrom with each MD step*.
such as :
#-----Colvar-------
&COLVAR
*&Distance*
&Point
Atoms 409
Type Geo_center
&End Point
&Point
Type Fix_point
xyz [angstrom] 4 7 7
&End Point
Points 1, 2
Axis x
&END Distance
&END COLVAR
&END SUBSYS
&MOTION
#===================
&Constraint
&Collective
Colvar 1
Intermolecular
Target 0
Target_limit 25
Target_Growth 0.01
&End Collective
#Constraint_init .True.
&Constraint_info
Filename = constraint.inf
&END Constraint_info
&END Constraint
#===================
&MD
ENSEMBLE NVE
STEPS 500
TIMESTEP 0.1
&END MD
But it seems do not run as I thinking.
Thanks for any reply, suggestion and comment.
Best regards,
Y. Huang
224,19 98%
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