[CP2K-user] install error w/scalapack on centos cluster

[Anton Kudelin]

Check make.log in $HOME/cp2k/cp2k-6.1/tools/toolchain/build/scalapack-2.0.2

понедельник, 3 декабря 2018 г., 23:58:50 UTC+3 пользователь cb4cp2k написал:
>
> Dear All,
>
> Currently Loaded Modulefiles:
>   1) slurm/14.03.0                      4) intel-psxe/2015-update1(default)
>   2) idev                               5) mpich/ge/open64/64/3.1
>   3) bbcp/amd64_rhel60                  6) lapack/open64/64/3.5.0
>
> Here/below is my latest attempt on a compute node.
>
> Please let me know if I can provide more info. Thanks in advance.
>
> Best,
> CB
>
> <my CLI prompt>./install_cp2k_toolchain.sh | tee install-log
> MPI is detected and it appears to be MPICH
> nvcc not found, disabling CUDA by default
> Compiling with 20 processes.
> ==================== Finding binutils from system paths 
> ====================
> path to ar is  /usr/bin/ar
> path to ld is  /usr/bin/ld
> path to ranlib is  /usr/bin/ranlib
> ==================== Finding make from system paths ====================
> path to make is  /usr/bin/make
> ==================== Finding GCC from system paths ====================
> path to gcc is  /usr/bin/gcc
> path to g++ is  /usr/bin/g++
> path to gfortran is  /usr/bin/gfortran
> Found include directory /usr/include
> Found lib directory /usr/lib64
> ==================== Getting proc arch info using OpenBLAS tools 
> ====================
> OpenBLAS detected LIBCORE = sandybridge
> OpenBLAS detected ARCH    = x86_64
> ==================== Finding MPICH from system paths ====================
> path to mpirun is  /cm/shared/apps/mpich/ge/open64/64/3.1/bin/mpirun
> path to mpicc is  /cm/shared/apps/mpich/ge/open64/64/3.1/bin/mpicc
> path to mpif90 is  /cm/shared/apps/mpich/ge/open64/64/3.1/bin/mpif90
> path to mpic++ is  /cm/shared/apps/mpich/ge/open64/64/3.1/bin/mpic++
> libmpi is found in ld search path
> libmpicxx is found in ld search path
> Found lib directory /share/apps/intel_parallel_studio_xe/2015_update1/impi/
> 5.0.2.044/intel64/lib
> ==================== Installing LAPACK ====================
> lapack-3.8.0 is already installed, skipping it.
> ==================== Finding MKL from system paths ====================
> MKLROOT is found to be 
> /share/apps/intel_parallel_studio_xe/2015_update1/composer_xe_2015.1.133/mkl
> libm is found in ld search path
> libdl is found in ld search path
> ==================== Installing FFTW ====================
> fftw-3.3.7 is already installed, skipping it.
> ==================== Installing LIBINT ====================
> libint-1.1.6 is already installed, skipping it.
> ==================== Installing LIBXC ====================
> libxc-4.0.3 is already installed, skipping it.
> ==================== Installing Libxsmm ====================
> libxsmm-1.9.0 is already installed, skipping it.
> ==================== Installing ScaLAPACK ====================
> --2018-12-03 13:54:22--  
> https://www.cp2k.org/static/downloads/scalapack-2.0.2.tgz
> Resolving www.cp2k.org... 94.130.188.107, 2a01:4f8:1c0c:8038::1
> Connecting to www.cp2k.org|94.130.188.107|:443... connected.
> HTTP request sent, awaiting response... 200 OK
> Length: 4779534 (4.6M) [application/x-gzip]
> Saving to: “scalapack-2.0.2.tgz”
>
> 100%[===================================================>] 4,779,534    
> 836K/s   in 5.9s
>
> 2018-12-03 13:54:28 (797 KB/s) - “scalapack-2.0.2.tgz” saved 
> [4779534/4779534]
>
> scalapack-2.0.2.tgz: OK
> Checksum of scalapack-2.0.2.tgz Ok
> Installing from scratch into 
> /lustre/project/hpcstaff/<USER>/cp2k/cp2k-6.1/tools/toolchain/install/scalapack-2.0.2
> ERROR: 
> (/lustre/project/hpcstaff/<USER>/cp2k/cp2k-6.1/tools/toolchain/scripts/install_scalapack.sh, 
> line 58) Non-zero exit code detected.
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20181203/3b6cc263/attachment.htm>