Restart well-tempered metadynamics with a new WTGAMMA?
gl... at bristol.ac.uk
gl... at bristol.ac.uk
Sun Oct 15 12:44:26 UTC 2017
I want to restart a well-tempered metadynamics run with a new value of
WTGAMMA (I think my converged fes resulted from an incomplete exploration
of the colvar space...). However, it is not clear to me that I can simply
do this with cp2k...
When doing a well-tempered meta dynamics run, are the HILLS in the cp2k
*.restart file already rescaled by WTGAMMA according to equation 6 of
Barducci et al (2008)? In other words, when I run graph.sopt to generate
fes.dat from the restart file, is the resulting fes F(s,t) = -V(s,t) or is
it F(s,t) = -WTGAMMA*V(s,t) (cf. equation 6 of Barducci et al., 2008)? If
graph.sopt produces -V(s,t), was the scaling done in graph.sopt by reading
WTGAMMA (or DELTA_T) from the restart file? If it is done in graph.sopt,
then restarting the simulation with a new WTGAMMA would give an incorrect
free energy surface. However, if the HILLS in *.restart have already been
scaled by the old value of WTGAMMA, I should be fine, right?
Thanks!
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