Conflict in parameters of unit cell after CELL_OPTIMIZATION
Amin
amin.jaf... at gmail.com
Wed Nov 15 00:51:24 UTC 2017
I took the initial unit cell from VNL's crystallographic database for
Anatase TiO2 and then I made the initial unit cell for Anatase (101) slab.
I ran the calculation for Cell Optimization and finally got the results
that I mentioned already. Maybe the procedure that I'm employing for making
the initial unit cell is not correct?
On Tuesday, November 14, 2017 at 11:02:29 PM UTC+1, Matt W wrote:
>
> Hi,
>
> I still don't really see anything very wrong with the setup (it is a bit
> inefficient, use smaller MAX_SCF in inner loop and FULL_ALL or
> FULL_SINGLE_INVERSE preconditioner).
>
> The initial structure seems very bad - are your coordinates/cell params
> correct? Perhaps you converge to a different polymorph or a local minima?
>
> Matt
>
> On Tuesday, November 14, 2017 at 12:14:09 PM UTC, Amin wrote:
>>
>> Hi Matt,
>>
>> Thanks for the feedback.
>> My results for a,b and c are 11.520*9.789*11.379 but the results in the
>> paper are 10.227*11.346*10.540 and yes my SCF converges.
>> I have tested with other structures but I couldn't achieve the same
>> results which have been done with the same criteria with CP2K. that's why I
>> thought there might be something wrong with my input file.
>>
>> Best,
>>
>> Amin
>>
>>
>> On Tuesday, November 14, 2017 at 12:45:57 PM UTC+1, Matt W wrote:
>>>
>>> Hi,
>>>
>>> what do you mean when you say that the results don't agree? Massively
>>> wrong, or a small difference?
>>>
>>> Does your SCF converge? I don't see any very obvious problems with your
>>> input at a quick glance.
>>>
>>> Matt
>>>
>>> On Tuesday, November 14, 2017 at 11:43:16 AM UTC+1, Amin wrote:
>>>>
>>>> Dear all,
>>>> I'm having problem with my CELL_OPT calculations. I tried to achieve
>>>> lattice parameters for Anatase (101) unit cell but my results are very
>>>> different than the other results coming from literature. Specially the
>>>> results mentioned in the reference paper of this exercise:
>>>> https://www.cp2k.org/exercises:2015_pitt:gga
>>>> I tried with/without the repetition of the unit cell but the final
>>>> lattice parameters was not consistent with those mentioned in literature.
>>>> I would be grateful if someone takes a look to my input file and
>>>> reminds me what's wrong with my calculations. thanks.
>>>>
>>>> &GLOBAL
>>>> PROJECT cell3
>>>> RUN_TYPE CELL_OPT
>>>> PRINT_LEVEL LOW
>>>> EXTENDED_FFT_LENGTHS
>>>> &END GLOBAL
>>>>
>>>> &FORCE_EVAL
>>>> METHOD Quickstep
>>>> STRESS_TENSOR ANALYTICAL
>>>> &DFT
>>>> BASIS_SET_FILE_NAME ./BASIS_MOLOPT
>>>> POTENTIAL_FILE_NAME ./GTH_POTENTIALS
>>>> UKS
>>>> WFN_RESTART_FILE_NAME s-RESTART.wfn
>>>> MULTIPLICITY 1
>>>> &QS
>>>> METHOD GPW
>>>> &END QS
>>>> &MGRID
>>>> CUTOFF 800
>>>> REL_CUTOFF 60
>>>> &END MGRID
>>>> &SCF
>>>> EPS_SCF 1.0E-6
>>>> MAX_SCF 150
>>>> &OUTER_SCF
>>>> EPS_SCF 1.0E-6
>>>> MAX_SCF 40
>>>> &END
>>>> &OT
>>>> PRECONDITIONER FULL_SINGLE
>>>> MINIMIZER CG
>>>> &END OT
>>>> SCF_GUESS ATOMIC
>>>> &END SCF
>>>> &XC
>>>> &XC_FUNCTIONAL PBE
>>>> &END XC_FUNCTIONAL
>>>> &vdW_POTENTIAL
>>>> DISPERSION_FUNCTIONAL PAIR_POTENTIAL
>>>> &PAIR_POTENTIAL
>>>> TYPE DFTD3(BJ)
>>>> REFERENCE_FUNCTIONAL PBE
>>>> CALCULATE_C9_TERM .FALSE.
>>>> PARAMETER_FILE_NAME ./dftd3.dat
>>>> R_CUTOFF 15.0
>>>> &END PAIR_POTENTIAL
>>>> &END vdW_POTENTIAL
>>>> &END XC
>>>> &PRINT
>>>> &HIRSHFELD
>>>> SELF_CONSISTENT .TRUE.
>>>> &END HIRSHFELD
>>>> &END PRINT
>>>> &POISSON
>>>> PERIODIC XYZ
>>>> POISSON_SOLVER PERIODIC
>>>> &END POISSON
>>>> &END DFT
>>>>
>>>> &SUBSYS
>>>> &CELL
>>>> ABC 10.2394 3.7845 3.513
>>>> PERIODIC XYZ
>>>> MULTIPLE_UNIT_CELL 1 3 3
>>>> &END CELL
>>>> &TOPOLOGY
>>>> MULTIPLE_UNIT_CELL 1 3 3
>>>> &END TOPOLOGY
>>>> &COORD
>>>> @INCLUDE 'cell3.coord'
>>>> &END COORD
>>>> &KIND O
>>>> BASIS_SET DZVP-MOLOPT-GTH
>>>> POTENTIAL GTH-PBE-q6
>>>> &END KIND
>>>> &KIND Ti
>>>> BASIS_SET DZVP-MOLOPT-SR-GTH
>>>> POTENTIAL GTH-PBE-q12
>>>> &END KIND
>>>> &END SUBSYS
>>>> &END FORCE_EVAL
>>>>
>>>> &MOTION
>>>> &GEO_OPT
>>>> TYPE MINIMIZATION
>>>> OPTIMIZER BFGS
>>>> &END GEO_OPT
>>>> &CELL_OPT
>>>> KEEP_SYMMETRY TRUE
>>>> KEEP_ANGLES TRUE
>>>> &END
>>>> &END MOTION
>>>>
>>>> cell3.coord:
>>>>
>>>> O 7.692165e-01 -3.336155e-17 1.170579e+00 0.07512 -0.00000
>>>> 0.33321
>>>> O 5.888893e+00 1.892250e+00 1.170579e+00 0.57512 0.50000
>>>> 0.33321
>>>> Ti 4.049520e+00 1.892250e+00 1.902225e+00 0.39549 0.50000
>>>> 0.54148
>>>> Ti 9.169196e+00 -3.976756e-16 1.902225e+00 0.89549 -0.00000
>>>> 0.54148
>>>> O 3.678746e+00 -1.595502e-16 2.049708e+00 0.35928 -0.00000
>>>> 0.58346
>>>> O 8.798422e+00 1.892250e+00 2.049708e+00 0.85928 0.50000
>>>> 0.58346
>>>> O 2.210147e+00 1.892250e+00 2.633872e+00 0.21585 0.50000
>>>> 0.74975
>>>> O 7.329824e+00 -3.179005e-16 2.633872e+00 0.71585 -0.00000
>>>> 0.74975
>>>> Ti 1.839373e+00 -7.977512e-17 2.781355e+00 0.17964 -0.00000
>>>> 0.79173
>>>> Ti 6.959049e+00 1.892250e+00 2.781355e+00 0.67964 0.50000
>>>> 0.79173
>>>> O 0.000000e+00 0.000000e+00 3.513001e+00 0.00000 0.00000
>>>> 1.00000
>>>> O 5.119676e+00 1.892250e+00 3.513001e+00 0.50000 0.50000
>>>> 1.00000
>>>>
>>>>
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