CP2K output files during mixed force evaluations
Jadzia
c.gor... at gmail.com
Mon Nov 6 07:12:35 UTC 2017
Could it be that it is not possible to deactivate the generation of the
restart-files every 500th step?
Possibly related CP2K options were missed in the code by accident by the
developers?
Best wishes,
Jadzia
On Friday, November 3, 2017 at 10:24:31 AM UTC+1, Jadzia wrote:
>
> Hi everyone,
>
> when running CP2K with mixed force evaluations some of the output files
> which are generated I do not understand.
>
> I have enabled the restart files in the &MOTION section, and get two
> restart files with the filenames:
>
> -
> * cp2k.out.restart *
> -
> * cp2k.out.restart.bak-1 *
>
> which is exactly how I would like it to be, no problem so far.
>
> The problem is that in addition I am getting every 500th step many more
> restart files with file names of the form "*cp2k.out-1_<step>.restart",
> i.e. *
>
> - *cp2k.out-1_500.restart*
> - *cp2k.out-1_1000.restart*
> - *cp2k.out-1_1500.restart*
> - *...*
>
> But why do I get them, and how can I disable their generation? My folder
> is filling up so quickly with these files that it is getting a problem.
>
> My input file is below, the two specific force evaluations which are
> included with @include are simple MM (Fist) force evaluations.
>
> Looking forward to hearing from you.
>
> Best wishes,
> Jadzia
>
>
> &GLOBAL
> PROJECT cp2k.out
> RUN_TYPE md
> PRINT_LEVEL medium
> &END global
>
> &MOTION
> &MD
> ENSEMBLE NPT_I
> STEPS 1000000
> TIMESTEP [fs] 1.0
> TEMPERATURE [K] 298
> &BAROSTAT
> PRESSURE [bar] 1.0
> TIMECON [fs] 200.0
> &END BAROSTAT
> &THERMOSTAT
> TYPE NOSE
> REGION molecule
> &NOSE
> TIMECON [fs] 200.0
> &END
> &END
> &END MD
> &PRINT
> &TRAJECTORY on
> FORMAT pdb
> FILENAME =cp2k.out.trajectory.pdb
> &EACH
> MD 1000
> &END EACH
> &END TRAJECTORY
> &RESTART
> ADD_LAST symbolic
> BACKUP_COPIES 1
> FILENAME =cp2k.out.restart
> &EACH
> MD 1000
> &END EACH
> &END RESTART
> &END PRINT
> &END MOTION
>
> &MULTIPLE_FORCE_EVALS
> FORCE_EVAL_ORDER 2 3
> MULTIPLE_SUBSYS true
> &END
>
> &FORCE_EVAL
> STRESS_TENSOR analytical
> METHOD mixed
> &MIXED
> MIXING_TYPE genmix
> &GENERIC
> VARIABLES a b
> MIXING_FUNCTION a+b
> &END
> @include ../../cp2k.in.mapping.single
> &END
> &SUBSYS
> &TOPOLOGY
> CONNECTIVITY off
> COORDINATE pdb
> COORD_FILE_NAME ../../system.lambda_0.000.opt.pdb
> &END TOPOLOGY
> &CELL
> ABC 26.000 26.000 25.000
> &END CELL
> &END SUBSYS
> &END FORCE_EVAL
>
> @include cp2k.in.force_eval_1
>
> @include cp2k.in.force_eval_2
>
>
>
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