FES (graph) program
Anthony Debellis
adebe... at gmail.com
Mon Mar 27 20:45:15 UTC 2017
Dear Sirs,
I am using the graph program to build the FES. I have "colvar" and
"parvar" files generated with CPMD (attached) which I use as a test case
for the graph program. I know from another program (Vreco) that the
minimum of my FES is ~ 94 kJ/mol. When I run "graph" using the following
command:
(to create a 1-d slice along CV 1, projected FES)
./graph.popt -cpmd -stride 50 -ndw 1 -ndim 2
and plot the result, the plot looks qualitatively correct but the magnitude
of the minimum seems incorrect.
What am I missing? What are the energy units in fes.dat? At which value
of CV 2 is the projected FES cut? (I assumed the value of CV2 at the
minimum of the 2-d FES)
Please help!
Anthony
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