[CP2K:8790] Re: How to incorporate EAM potentials in QMMM calculations
Dorothea Golze
dorothe... at googlemail.com
Wed Mar 8 08:55:28 UTC 2017
Hi Rahul,
for this kind of setup I use typically &MULTIPLE_FORCE_EVALS to make sure
that different Fist neighbor lists don't interfere with each other. The EAM
part goes to a separate FORCE_EVAL und the rest of the QM/MM to another
FORCE_EVAL.
But it's not possible to tell something more specific without knowing your
input file.
Kind regards,
Dorothea
2017-03-08 6:09 GMT+02:00 Rahul Hardikar <hardika... at gmail.com>:
> Following on yesterdays post, I got this error when I included EAM in MM
> and did a QM/MM calculation for Pt surfaces.
>
> THERMOSTAT| Thermostat Info for PARTICLES
> THERMOSTAT| Type of thermostat Adaptive Langevin
> THERMOSTAT| AD_LANGEVIN NH time constant [ fs]
> 1000.00
> THERMOSTAT| AD_LANGEVIN Langevin time constant [ fs]
> 100.00
> THERMOSTAT| End of Thermostat Info for PARTICLES
>
> ************************** Velocities initialization
> **************************
> Initial Temperature
> 0.00 K
> COM velocity: 0.000000000000 0.000000000000
> 0.000000000000
> ***********************************************************
> ********************
>
>
> Translating the system in order to center the QM fragment in the QM box.
> forrtl: severe (174): SIGSEGV, segmentation fault occurred
> Image PC Routine Line
> Source
> cp2k.popt 0000000002A3AA51 Unknown Unknown Unknown
> cp2k.popt 0000000002A38F07 Unknown Unknown Unknown
> cp2k.popt 00000000029CAE24 Unknown Unknown Unknown
> cp2k.popt 00000000029CAC36 Unknown Unknown Unknown
> cp2k.popt 0000000002979656 Unknown Unknown Unknown
> cp2k.popt 000000000298109D Unknown Unknown Unknown
> libpthread.so.0 00002B5243BE0100 Unknown Unknown Unknown
> cp2k.popt 0000000001697B3D manybody_eam_mp_d 144
> manybody_eam.F
> cp2k.popt 00000000012E09EC fist_force_mp_fis 301
> fist_force.F
> cp2k.popt 0000000001803500 qmmm_force_mp_qmm 166
> qmmm_force.F
> cp2k.popt 0000000001371F64 qmmmx_force_mp_qm 229
> qmmmx_force.F
> cp2k.popt 00000000013701E8 qmmmx_force_mp_qm 97
> qmmmx_force.F
> cp2k.popt 0000000000A7E861 force_env_methods 231
> force_env_methods.F
> cp2k.popt 0000000000542697 md_run_mp_qs_mol_ 381
> md_run.F
> cp2k.popt 0000000000541C16 md_run_mp_qs_mol_ 156
> md_run.F
> cp2k.popt 0000000000420772 cp2k_runs_mp_run_ 335
> cp2k_runs.F
> cp2k.popt 0000000000407D76 MAIN__ 281 cp2k.F
> cp2k.popt 00000000004072CE Unknown Unknown Unknown
> libc.so.6 00002B5244F30B15 Unknown Unknown Unknown
> cp2k.popt 00000000004071D9 Unknown Unknown Unknown
>
>
> Hope this helps to understand where things are going wrong.
> Regards,
> Rahul
>
>
> On Tuesday, March 7, 2017 at 11:41:57 PM UTC+5:30, Rahul Hardikar wrote:
>>
>> Dear CP2K users,
>>
>> I am simulating a QMMM system of Pt layers where the MM NONBONDED part
>> includes EAM potential. It seems that the QMMM calculations stop (without
>> error) while calculating FIST forces
>> when the EAM potential is included. However, when the Lennard-Jones
>> potential (although not realistic) is used the calculations proceeds to the
>> QM and MM sections.
>>
>> Has anybody looked into such problem in their project? Any help will be
>> appreciated!
>>
>> Regards,
>> Rahul
>>
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