Using DTFD3(BJ) for molecular dynamics
Richard Edwards
edwa... at gmail.com
Wed Aug 10 19:08:19 UTC 2016
Hello,
I have been working with small (20-40 atom) quantum dots and am trying to
see at what temperature the conformation is stable. Without including
dispersion forces the structures were stable above 300K but with DFTD3 the
structure began to break at much lower temperatures ~125K. To get a more
accurate idea of the working temperature I attempted to use DFTD3(BJ)
however when I used the parameters retrieved from the cp2k manual site and
the following input code section:
&XC_FUNCTIONAL PBE
&END XC_FUNCTIONAL
&VDW_POTENTIAL
POTENTIAL_TYPE PAIR_POTENTIAL
&PAIR_POTENTIAL
TYPE DFTD3(BJ)
REFERENCE_FUNCTIONAL PBE
PARAMETER_FILE_NAME
/bg01/homescinet/i/ihamilto/edwa3980/DFTD3BJ_Parameters/reference.dat
R_CUTOFF 15
&END
&END
I got the following output file:
*****************************************************************************
*** 14:56:52 ERRORL2 in input_enumeration_types:enum_c2i :: invalid value
***
*** for enumeration:DFTD3(BJ)
***
*****************************************************************************
*****************************************************************************
*** 14:56:52 ERRORL2 in input_enumeration_types:enum_c2i :: invalid value
***
*** for enumeration2:DFTD3(BJ)
***
*****************************************************************************
Looking for words in the input similar to the unknown:
'DFTD3(BJ)'
enum DFTD2 in section
%__ROOT__%FORCE_EVAL%DFT%TDDFPT%XC%VDW_POTENTIAL%PAIR_POTENTIAL for keyword
TYPE
enum DFTD3 in section
%__ROOT__%FORCE_EVAL%DFT%TDDFPT%XC%VDW_POTENTIAL%PAIR_POTENTIAL for keyword
TYPE
enum DFTD2 in section
%__ROOT__%FORCE_EVAL%DFT%XC%VDW_POTENTIAL%PAIR_POTENTIAL for keyword TYPE
enum DFTD3 in section
%__ROOT__%FORCE_EVAL%DFT%XC%VDW_POTENTIAL%PAIR_POTENTIAL for keyword TYPE
enum DFTD2 in section
%__ROOT__%FORCE_EVAL%PROPERTIES%LINRES%EPR%PRINT%G_TENSOR%XC%VDW_POTENTIAL%PAIR_POTENTIAL
for keyword TYPE
enum DFTD3 in section
%__ROOT__%FORCE_EVAL%PROPERTIES%LINRES%EPR%PRINT%G_TENSOR%XC%VDW_POTENTIAL%PAIR_POTENTIAL
for keyword TYPE
enum DFTD2 in section
%__ROOT__%ATOM%METHOD%XC%VDW_POTENTIAL%PAIR_POTENTIAL for keyword TYPE
enum DFTD3 in section
%__ROOT__%ATOM%METHOD%XC%VDW_POTENTIAL%PAIR_POTENTIAL for keyword TYPE
subsection DFT in section %__ROOT__%FORCE_EVAL
enum DFTB in section %__ROOT__%FORCE_EVAL%DFT%QS for keyword METHOD
subsection DFTB in section %__ROOT__%FORCE_EVAL%DFT%QS
CP2K failed to parse the input file.
A full description of the input for this CP2K version
can be generated using:
cp2k.sopt --html-manual
The manual for the latest version of CP2K is online available:
http://manual.cp2k.org/trunk
If this input was an input of a previous version
of CP2K, you can try to convert it with --permissive-echo.
However, this will just ignore the unknown keywords ...
CP2K| Abnormal program termination, stopped by process number 0
Does anyone know why it does not seem to recognize the DFTD3BJ type
command? Or has anyone set up these calculations that can provide any
insight to help me run these.
Thanks, Richard Edwards
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