optimizing parameters for a complex and its pieces
eft rsd
rashe... at gmail.com
Fri Nov 27 18:39:46 UTC 2015
My question is rather general and not exclusive to CP2K, however, and as I
am new to simulations, I hope to get advice from people with experience in
both simulations and CP2K.
Suppose I have two species, A & B, and that I want to calculate their
binding energy upon making the complex AB. This value is given as (total
energy(AB)-[total energy(A)+total energy(B)]).
Do we need to
1-optimize the MGRID parameters for A, B and AB separately?
2-or is it enough to use the optimized parameters for AB and apply them to
A, and B?
What if I want to compare the structure of A and B before and after
complexation? Would using different sets of optimized parameters for
individual A and B and then for AB still allow reliable comparison of the
structural parameters?
How good/bad would that affect the comparison?
Thanks,
ER
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