q-TIP4P/F
daniel.... at gmail.com
daniel.... at gmail.com
Thu Feb 26 14:07:45 UTC 2015
I am trying to implement q-TIP4P/F (a flexible, 4-point water model: J.
Chem. Phys. 131, 024501 (2009)) into cp2k using the VIRTUAL_SITE module to
keep the negative charge in place. I was able to implement TIP4P (a rigid
model) without any problem, but I get the following error when I try to use
q-TIP4P/F:
*********************************************************
*** ERROR in get_molecule (MODULE molecule_types_new) ***
*********************************************************
*** The pointer lci is not associated ***
I assume this is because VIRTUAL_SITE only works with constrained
molecules. If so, is there another way to constrain the negative charge for
a flexible 4-point model?
I’ve inserted the key areas of my input file for TIP4P (which works) and
q-TIP4P/F (which doesn’t work) below. I’ve also attached a full input file.
Thanks,
--
Daniel Sadowsky
Ecole Polytechnique Fédérale de Lausanne
Environmental Chemistry Modeling Laboratory
@IF ( ${MD_FF} == TIP4P )
&CONSTRAINT
SHAKE_TOLERANCE 1.0E-12
&G3X3
MOLECULE 2
ATOMS 1 2 3
DISTANCES [angstrom] 0.95720 0.95720 1.51390
&END G3X3
&VIRTUAL_SITE
INTERMOLECULAR FALSE
ATOMS 4 2 1 3
PARAMETERS 0.128012065 0.128012065
MOLECULE 2
&END VIRTUAL_SITE
&END CONSTRAINT
@ENDIF
@IF ( ${MD_FF} == QTIP4PF )
&CONSTRAINT
SHAKE_TOLERANCE 1.0E-12
&G3X3
MOLECULE 2
ATOMS 1 2 3
DISTANCES [angstrom] 0.95720 0.95720 1.51390
&END G3X3
&VIRTUAL_SITE
INTERMOLECULAR FALSE
ATOMS 4 2 1 3
PARAMETERS 0.131940 0.131940
MOLECULE 2
&END VIRTUAL_SITE
&END CONSTRAINT
@ENDIF
@IF ( ${MD_FF} == QTIP4PF )
&BOND
ATOMS Ow Hw
KIND QUARTIC
K 0.541925 -0.983779 0.926020
R0 [angstrom] 0.9419
&END BOND
&BEND
ATOMS Hw Ow Hw
KIND HARMONIC
K 0.139998
THETA0 [deg] 107.40
&END BEND
@ENDIF
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