[CP2K:5813] Compiling with hwloc

[Christiane Pousa]

Dear Vedran,

Could you please add the line bellow to your arch file and give a try?

HWTOPO   = yes

You should include too the -I/usr/include/hwloc.

Best regards,



On Tue, Nov 4, 2014 at 10:34 PM, Vedran Miletić <riv... at gmail.com> wrote:

> Hello,
>
> I'm trying to compile CP2K with hwloc support enabled. I'm using Debian
> testing with gfortran 4.9. My arch file is:
>
> CC       = mpicc
> CPP      =
> FC       = mpif90
> LD       = gfortran
> AR       = ar -r
>
> DFLAGS   = -D__GFORTRAN -D__parallel -D__HWLOC -D__FFTSG -D__FFTW3
> -D__LIBINT -D__LIBXC2 -D__BLACS -D__SCALAPACK -D__ELPA
> CPPFLAGS = -C -traditional $(DFLAGS)
> FCFLAGS  = -g -Wall -O3 -ffast-math -funroll-loops -ftree-vectorize
> -ffree-form -ffree-line-length-none $(DFLAGS) -I/usr/include/elpa/modules
> LDFLAGS  = $(FCFLAGS)
> LIBS     = -llapack -lblas -lfftw3 -lint -lderiv -lxc -lhwloc -lmpi
> -lmpif90 -lmpif77 -lblacsCinit-openmpi -lblacs-openmpi -lscalapack-openmpi
> -lelpa
>
> Upon compiling, I get:
>
>      cardId = ma_get_netDev(my_info%core, my_info%mp_info%myproc)
>               1
> Error: Function 'ma_get_netdev' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:1041.8:
>
>    IF ( ma_get_nnetDev(node) .GT. 0 ) THEN
>         1
> Error: Function 'ma_get_nnetdev' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:1044.12:
>
>      node = ma_get_node_netDev()
>             1
> Error: Function 'ma_get_node_netdev' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:937.39:
>
>   my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>                                        1
> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:744.14:
>
>     my_node = ma_get_core_node(my_core)
>               1
> Error: Function 'ma_get_core_node' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:693.41:
>
>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>                                          1
> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:628.41:
>
>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>                                          1
> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
> mpif90 -c -g -Wall -O3 -ffast-math -funroll-loops -ftree-vectorize
> -ffree-form -ffree-line-length-none -D__GFORTRAN -D__parallel -D__HWLOC
> -D__FFTSG -D__FFTW3 -D__LIBINT -D__LIBXC2 -D__BLACS -D__SCALAPACK -D__ELPA
> -I/usr/lib/openmpi/include/openmpi/opal/mca/hwloc/
> -I/usr/include/elpa/modules
> -D__COMPILE_ARCH="\"Linux-x86-64-debian-gfortran\"" -D__COMPILE_DATE="\"Uto
> Stu  4 22:28:09 CET 2014\"" -D__COMPILE_HOST="\"akston\""
> -D__COMPILE_REVISION="\"git:eb7b195\"" -D__SHORT_FILE__="\"cp_files.F\""
> /home/vedranm/workspace/cp2k.git/cp2k/src/common/cp_files.F
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:528.38:
>
>     my_info%threads_info(id+1)%node = ma_get_core_node(core)
>                                       1
> Error: Function 'ma_get_core_node' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:530.41:
>
>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>                                          1
> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:454.41:
>
>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>                                          1
> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:376.41:
>
>     my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>                                          1
> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:316.39:
>
>   my_info%threads_info(id+1)%id_real = ma_get_thread_id()
>                                        1
> Error: Function 'ma_get_thread_id' at (1) has no IMPLICIT type
> /home/vedranm/workspace/cp2k.git/cp2k/src/ma/ma_affinity.F:321.33:
>
>   my_info%threads_info(1)%node = ma_get_core_node(core)
>                                  1
> Error: Function 'ma_get_core_node' at (1) has no IMPLICIT type
>
> I tried adding -I/usr/include/hwloc and
> -I/usr/lib/openmpi/include/openmpi/opal/mca/hwloc but it made no change.
> Any ideas?
>
> Regards,
> Vedran Miletić
>
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-- 
[]'s
Christiane Pousa Ribeiro

"Judge a man by his questions, rather than by his answers"
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