Huge number of imaginary frequencies
Tobias Kraemer
161brun... at gmail.com
Thu Jul 3 13:08:30 UTC 2014
Hello,
I have completed my first vibrational frequency calculation, following a
geometry optimization of an organometallic molecular
crystal. However, the output of the freq job reveals 400+ imaginary modes,
ranging from -6516 cm-1 to -40 cm-1. To me this
looks suspiciously like something went pretty wrong. As far as cutoffs and
other parameters are concerned, I have done testing
to (hopefully) ensure good values are used. So I ended up using a cutoff of
1000 Ry and a rel. cutoff of 60 Ry. For consistency I have used
DZVP-MOLOPT-SR-GTH as basis on all atoms (Rh, P, C, H, B, F) in combination
with the GTH pseudos. The structure seems to have
converged to a reasonable "minimum", so from this point of view I didn't
see anything odd going on. The system contains
a large number of fluorine atoms due to the presence of BArF4 (=[B[3,5-(CF3)
2C6H3]4]−) counterions. I understood from previous forum posts
that fluorine can be difficult at times. I have also done an optimization
using a higher cutoff (1200 Ry) and tighter convergence criteria,
but other than taking about twice as many steps as before, the bond metric
parameters remained essentially unchanged.
I used coordinates from the optimized geometry for the subsequent
vibrational analysis, basically leaving all parameters untouched,
just changing corresponding keywords in the VIBRATIONAL_ANALYSIS block. All
input files are attached to the post (output files were
too large to be uploaded I am afraid). Like I've said above, the geometry
'looks' perfectly fine to me, and I could have lived with perhaps 2-3
imaginary frequencies. But 450 is a bit awkward, especially with such large
energy (>6000 cm-1).
VIB| NORMAL MODES - CARTESIAN DISPLACEMENTS
VIB|
VIB| 1 2 3
VIB|Frequency (cm^-1) -6416.230457 -6359.574009
-5920.931547
VIB|Intensities 1.151212 1.257309
0.570843
VIB|Red.Masses (a.u.) 1.251703 1.632844
1.281401
VIB|Frc consts (a.u.) -5.431171 -6.837998
-4.031972
ATOM EL X Y Z X Y Z X
Y Z
1 F 0.00 0.00 0.00 -0.00 -0.00 0.00 0.00 0.00
0.00
2 F -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00
0.00
3 F 0.00 -0.00 -0.00 -0.00 -0.00 -0.00 0.00 -0.00
0.00
4 F 0.00 -0.00 0.00 0.00 0.00 -0.00 0.00 -0.00
0.00
5 F 0.00 -0.00 -0.00 0.00 0.00 0.00 0.00 -0.00
-0.00
6 F 0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00
-0.00
7 F -0.00 0.00 -0.00 0.00 0.00 0.00 -0.00 -0.00
-0.00
8 F 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 0.00
0.00
9 F 0.00 -0.00 0.00 0.00 -0.00 0.00 -0.00 -0.00
0.00
10 F 0.00 -0.00 0.00 0.00 0.00 0.00 0.00 -0.00
-0.00
11 F 0.00 -0.00 0.00 -0.00 0.00 0.00 -0.00 -0.00
-0.00
12 F -0.00 0.00 -0.00 0.00 -0.00 0.00 -0.00 0.00
-0.00
13 F -0.00 -0.00 0.00 -0.00 0.00 -0.00 -0.00 -0.00
-0.00
14 F 0.00 0.00 0.00 -0.00 -0.00 -0.00 0.00 -0.00
0.00
....
I wonder what I am doing wrong, since I am not sure if I trust this result.
According to the vibrational analysis, this geometry is not a minimum at
all,
but I don't know how reliable this is. Thought that spring to mind: should
I rather perform a full cell relaxation without fixing the unit cell? Can
the fluorine
atoms cause this problem, and if yes, what would be a remedy for this?
Should I decrease the DX value?
Note that the geometry optimisation was done on a local cluster, using
version 2.5.1, while the frequency job was
performed externally with 2.6. I suspect that this should not make a
difference though.
If anyone has some spare time to look at my inputs and the structure, I
would very much appreciate this. I am a newbie to cp2k, and following
trial-and-error, have to ask a lot of questions here.
Best
Tobias
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