[CP2K:4664] How many cores can CP2K utilize in parallel computing.
huan... at mail.huji.ac.il
huan... at mail.huji.ac.il
Thu Oct 3 12:59:30 UTC 2013
Dear Jörg,
Thank you very much. :)
All the best,
Huan
On Thursday, October 3, 2013 2:45:07 PM UTC+2, sassy wrote:
>
> Hi Huan,
>
> > I would like to know is there an up-limit number of cores for CP2K
> parallel
> > computing. My supervisor want to purchase some new computers for running
> > CP2K/QuickStep. So we need to make sure that is it possible to run
> parallel
> > computing with, such as, 40 or more cores?
>
> Yes we can! (Obama).
> Yes, you can run cp2k on more than 40 cores. Some of the guys here are
> using a
> few hundreds of cores on the national cluster.
>
> > Another question is that Is it possible for sharing the CPU in different
> > nodes for parallel computing? For example, if it is possible to use 2
> nodes
> > (each node has 40 processors) for one MD simulation? If it available,
> how
> > to do it? Do I need to write some special codes in submitting script?
> The
> > version of CP2K I used is 2.3.
>
> Again, you can. That is where the MPI kicks in.
> I have done runs between 36 nodes. However, if you are a using a large
> number
> of nodes (these are the physical boxes) you will need a fast network
> connection between the nodes here. That is the reason why people are using
> networks like InfiniBand.
>
> > I appreciated it very much if someone could answer my questions. Thanks
> in
> > advance.
>
> You are welcome.
>
> All the best from a grey London!
>
> Jörg
>
> > Best regards,
> > Huan
>
> --
> *************************************************************
> Jörg Saßmannshausen
> University College London
> Department of Chemistry
> Gordon Street
> London
> WC1H 0AJ
>
> email: j.sas... at ucl.ac.uk <javascript:>
> web: http://sassy.formativ.net
>
> Please avoid sending me Word or PowerPoint attachments.
> See http://www.gnu.org/philosophy/no-word-attachments.html
>
>
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