[CP2K:4252] Parallel cp2k installation trouble
Jana
jahodov... at gmail.com
Mon Jan 21 16:06:48 UTC 2013
Please, could you help me someone? I am still stuck with this last weeks
error, tho i tried to get different versions of libraries and mpi and all
links in ARCH seem to be fine, also no complaints in the output as far as I
could notice, except the one that executable wasnt created (so there must
be something wrong). The dflags and addresses i provided in arch should be
in the right order and correct, i used atlas instead of blas+lapack (I
listed all the libs in the lib directory)
In order to determine what's wrong I tried to compile serial version only
with blas and lapack library but I got whole lot of stuff like that
TL_lauumU.c:(.text+0x124): undefined reference to `cblas_ztrmm'
/home/mathausj/atl_jm/lib/liblapack.a(ATL_clauumCL.o): In function
`ATL_clauumCL':
ATL_lauumL.c:(.text+0xe1): undefined reference to `cblas_cherk'
ATL_lauumL.c:(.text+0x123): undefined reference to `cblas_ctrmm'
/home/mathausj/atl_jm/lib/liblapack.a(ATL_clauumCU.o): In function
`ATL_clauumCU':
ATL_lauumU.c:(.text+0xe1): undefined reference to `cblas_cherk'
ATL_lauumU.c:(.text+0x123): undefined reference to `cblas_ctrmm'
/home/mathausj/atl_jm/lib/liblapack.a(ATL_clauumRL.o): In function
`ATL_clauumRL':
ATL_lauumL.c:(.text+0xe1): undefined reference to `cblas_cherk'
ATL_lauumL.c:(.text+0x123): undefined reference to `cblas_ctrmm'
/home/mathausj/atl_jm/lib/liblapack.a(ATL_clauumRU.o): In function
`ATL_clauumRU':
ATL_lauumU.c:(.text+0xe1): undefined reference to `cblas_cherk'
ATL_lauumU.c:(.text+0x123): undefined reference to `cblas_ctrmm'
/home/mathausj/atl_jm/lib/liblapack.a(dorm2l.o): In function `dorm2l_':
dorm2l.f:(.text+0x89): undefined reference to `lsame_'
dorm2l.f:(.text+0xab): undefined reference to `lsame_'
dorm2l.f:(.text+0xec): undefined reference to `lsame_'
dorm2l.f:(.text+0x124): undefined reference to `lsame_'
dorm2l.f:(.text+0x1e3): undefined reference to `xerbla_'
Please, I will be really grateful for anything, because I really don't have
a clue what to do and it's been like that since last week. I am really
sorry to bother you but I have no experience with this sort of work and
neither does my superviser or anyone around at the department but i
desperatly need paralellized software because gaussian is not able to
perform the calculations i need for my thesis.
On Thursday, January 17, 2013 4:00:02 PM UTC+1, Jana wrote:
>
> Hi,
>
> Ok, thanks. I have ended up eith an error again though
> ifort: error #10236: File not found:
> '/home/mathausj/cp2k-2.3/makefiles/../exe/Linux-x86-64-intel/cp2k.popt'
>
>
> On Thursday, January 17, 2013 3:42:50 PM UTC+1, Urban wrote:
>>
>> Hi,
>>
>> You should edit your ARCH file to either explicitly include the paths to
>> these libraries (i.e., -l/path/to/lib/libatlas.a) or set the variable to
>> that path (whatever that variable is in the ARCH file you are using).
>>
>> Best regards,
>> Urban.
>>
>> On Thu, 2013-01-17 at 06:24 -0800, Jana wrote:
>> > Hi,
>> > I am trying to install parallel cp2k but I am having troubles with the
>> > libraries needed
>> >
>> > According to the install instructions getting atlas with lapack and
>> > scalapac should be enough to compile cp2k.
>> > So I have installed it but I got the atlas libraries
>> >
>> > libatlas.a
>> > libcblas.a
>> > libf77blas.a
>> > libf77refblas.a
>> > liblapack.a
>> > libptf77blas.a
>> > libptlapack.a
>> > libstalas.so
>> > libtatlas.so
>> > libstatlas.a
>> >
>> >
>> > but Linux-x86-64-intel.popt apparently requires another libs
>> >
>> > ifort: error #10236: File not found: '/libblacs_init.a'
>> > ifort: error #10236: File not found: '/libblacs.a'
>> > ifort: error #10236: File not found: '/libacml.a'
>> > ifort: error #10236: File not found: '/libacml_mv.a'
>> > ifort: error #10236: File not found: '/libfftw3.a'
>> >
>> > I am confused now,
>> > please could anybody help me?
>> >
>> > Sorry for a stupid question I have virtually no experience in this
>> > field...
>> >
>> >
>> >
>> >
>> >
>> > --
>> > You received this message because you are subscribed to the Google
>> > Groups "cp2k" group.
>> > To view this discussion on the web visit
>> > https://groups.google.com/d/msg/cp2k/-/gHHGGLXjsKsJ.
>> > To post to this group, send email to cp... at googlegroups.com.
>> > To unsubscribe from this group, send email to cp2k
>> > +unsu... at googlegroups.com.
>> > For more options, visit this group at
>> > http://groups.google.com/group/cp2k?hl=en.
>>
>>
>>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20130121/67c1c847/attachment.htm>
More information about the CP2K-user
mailing list