[CP2K:4828] harmonic constraint on collective variable
Teodoro Laino
teodor... at gmail.com
Mon Dec 16 16:43:23 UTC 2013
Not entirely sure: but COLVAR used in constrained cannot be used in METADYN and vice versa.
Try removing FREE_ENERGY section and it should work.
Also, if you have more colvar you have to specify COLVAR in the COLLECTIVE section.
On 16 Dec 2013, at 17:24, jacopos <sgr... at gmail.com> wrote:
> Dear all
> I'm trying to perform a simulation applying a harmonic constraint on a Collective variable (something like Umbrella sampling).
> I tried different keywords but, unfortunately, the value of the Collective Var does not change during the simulation.
>
> My input file is below (the part concerning the constraint) can you help me to solve this problem?
>
> Thanks
>
> Jacopo
>
> &GLOBAL
> PREFERRED_FFT_LIBRARY FFTSG
> PRINT_LEVEL LOW
> PROGRAM CP2K
> PROJECT md3
> RUN_TYPE md
> #ECHO_INPUT
> &END GLOBAL
>
> &MOTION
> &FREE_ENERGY
> &METADYN
> DO_HILLS .FALSE.
> &METAVAR
> COLVAR 1
> SCALE 1.
> &END
> &PRINT
> &COLVAR
> COMMON_ITERATION_LEVELS 3
> &EACH
> MD 1
> &END
> &END
> &END
> &END METADYN
> &END FREE_ENERGY
>
> &CONSTRAINT
> &COLLECTIVE
> INTERMOLECULAR F
> TARGET [angstrom] 3.0
> TARGET_GROWTH [angstrom*fs^-1] 1.0
> TARGET_LIMIT [angstrom] 2.9
> &RESTRAINT
> K=1.00
> &END
> &END
> &END
> &MD
> ENSEMBLE NVT
> STEPS 400
> TIMESTEP 0.50
> TEMPERATURE 298.5
> &THERMOSTAT
> TYPE NOSE
> REGION MASSIVE
> &NOSE
> TIMECON [wavenumber_t] 2000
> &END NOSE
> &END THERMOSTAT
> &PRINT
> &ENERGY
> &EACH
> MD 1
> &END EACH
> FILENAME =md2.ener
> &END ENERGY
> &END PRINT
> &END MD
> &PRINT
> &TRAJECTORY SILENT
> &EACH
> MD 5
> &END EACH
> FILENAME =md6.dcd
> FORMAT DCD
> &END TRAJECTORY
> &VELOCITIES OFF
> &END VELOCITIES
> &FORCES OFF
> &END FORCES
> &RESTART
> &EACH
> MD 2
> &END EACH
> FILENAME =md2.restart
> &END RESTART
> &END PRINT
> &END MOTION
>
>
>
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