Segmentation fault problem
Zhiping
xuzh... at gmail.com
Sat Sep 15 20:02:35 UTC 2012
Dear all:
I compile cp2k using intel compiler and MKL 11.1.069. Parallel compilation
is done with intel mpi 4.0.2.003.
While no error is reported during the compilation and I obtain the
binaries. I found that serial executable works but the parallel one fails
with 'Segmentation fault (174)' on the test runs.
I follow the threads in several forums and tries several tricks such as
'ulimit -s unlimited', but still cannot get it working. Could anybody here
give some suggestions?
Thank you.
Best,
Zhiping
--
App. 1: OUTPUT of uname 0a
Linux ln1 2.6.18-194.17.1.0.1.el5_lustre.1.8.5 #1 SMP Wed Aug 3 18:09:09
CST 2011 x86_64 x86_64 x86_64 GNU/Linux
App. 2: FILE: Linux-x86_64-intel.popt
#
INTEL_INC=/apps/intel/Compiler/11.1/069/c/mkl/include/fftw
INTEL_LIB=/apps/intel/Compiler/11.1/069/c/mkl/lib/em64t
FFTW3_INC=/home/user/bin/lib/fftw3/include
FFTW3_LIB=/home/user/bin/lib/fftw3/lib
INT_INC=/home/user/bin/lib/libint/include
INT_LIB=/home/user/bin/lib/libint/lib
CC = cc
CPP =
FC = mpiifort
LD = mpiifort
AR = ar -r
DFLAGS = -D__INTEL -D__FFTSG -D__parallel -D__BLACS -D__SCALAPACK
-D__FFTW3 -D__LIBINT -D__HAS_NO_ISO_C_BINDING
CPPFLAGS = -C -traditional $(DFLAGS) -I$(INTEL_INC) -I$(INT_INC)
-I$(FFTW3_INC)
FCFLAGS = $(DFLAGS) -I$(INTEL_INC) -I$(INT_INC) -I$(FFTW3_INC) -O3 -xW
-heap-arrays 64 -funroll-loops -fpp -free
FCFLAGS2 = $(DFLAGS) -I$(INTEL_INC) -I$(INT_INC) -I$(FFTW3_INC) -O1 -xW
-heap-arrays 64 -fpp -free
LDFLAGS = $(FCFLAGS) -I$(INTEL_LIB) -L$(INT_LIB) -L$(FFTW3_LIB)
LIBS = $(LDFLAGS) -lmkl_scalapack_lp64 -lmkl_intel_lp64
-lmkl_blacs_intelmpi_lp64 -lmkl_lapack95_lp64 -lmkl_sequential -lmkl_core
-lguide -lfftw3 /home/user/bin/lib/libint/lib/libint_cpp_wrapper.o -lderiv
-lint -lr12 -lstdc++
OBJECTS_ARCHITECTURE = machine_intel.o
graphcon.o: graphcon.F
$(FC) -c $(FCFLAGS2) $<
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20120915/f90564af/attachment.htm>
More information about the CP2K-user
mailing list