JOB PROBLEM

bharat bharats... at gmail.com
Tue Jun 19 16:26:43 CEST 2012


Dear Experts,

I am new to CP2K. I have successfully compiled but I have got the following 
error message. Please I need your help. Thank you in advance.

Sincerely,
Bharat

############################################################################################################
tset: standard error: Inappropriate ioctl for device

cd /RQusagers/sharmabh/test2/test2
eval `/share/apps/Modules/$MODULE_VERSION/bin/modulecmd tcsh load 
mkl/11.1.073`
/share/apps/Modules/3.2.5/bin/modulecmd tcsh load mkl/11.1.073
setenv CPATH /share/apps/intel/Compiler/11.1/073/mkl/include
setenv FPATH 
/share/apps/intel/Compiler/11.1/073/mkl/include:/etc/ksh.fpath:/etc/ksh.fpath
setenv LD_LIBRARY_PATH 
/share/apps/intel/Compiler/11.1/073/mkl/lib/em64t:/share/apps/intel/Compiler/11.0/083/lib/intel64:/opt/intel/fce/11.0.069/lib:/opt/intel/cce/11.0.069/lib
setenv LIBRARY_PATH /share/apps/intel/Compiler/11.1/073/mkl/lib/em64t
setenv LOADEDMODULES intel-compilers/11.0.083:modules:mkl/11.1.073
setenv MKLROOT /share/apps/intel/Compiler/11.1/073/mkl
setenv _LMFILES_ 
/share/apps/Modules/modulefiles/intel-compilers/11.0.083:/share/apps/Modules/3.2.5/modulefiles/modules:/share/apps/Modules/modulefiles/mkl/11.1.073
set _exit=0
test 0 = 0
eval `/share/apps/Modules/$MODULE_VERSION/bin/modulecmd tcsh load 
openmpi_intel64`
/share/apps/Modules/3.2.5/bin/modulecmd tcsh load openmpi_intel64
setenv CPATH 
/share/apps/openmpi/intel/1.4.1/include:/share/apps/intel/Compiler/11.1/073/mkl/include
setenv FPATH 
/share/apps/openmpi/intel/1.4.1/include:/share/apps/intel/Compiler/11.1/073/mkl/include:/etc/ksh.fpath:/etc/ksh.fpath
setenv LD_LIBRARY_PATH 
/opt/torque/lib64:/share/apps/openmpi/intel/1.4.1/lib:/share/apps/intel/Compiler/11.1/073/mkl/lib/em64t:/share/apps/intel/Compiler/11.0/083/lib/intel64:/opt/intel/fce/11.0.069/lib:/opt/intel/cce/11.0.069/lib
setenv LIBRARY_PATH 
/opt/torque/lib64:/share/apps/openmpi/intel/1.4.1/lib:/share/apps/intel/Compiler/11.1/073/mkl/lib/em64t
setenv LOADEDMODULES 
intel-compilers/11.0.083:modules:mkl/11.1.073:openmpi_intel64/1.4.1
setenv MANPATH 
/share/apps/openmpi/intel/1.4.1/share/man:/share/apps/Modules/3.2.5/man:/share/apps/intel/Compiler/11.0/083/man::/opt/intel/fce/11.0.069/man:/opt/intel/cce/11.0.069/man:/opt/intel/clck/1.3/doc/man:/usr/share/man:/usr/local/share/man:/opt/rocks/man:/opt/torque/man:/opt/ganglia/man:/opt/mpich/gnu/man
setenv OMPI_LDFLAGS -shared-intel
setenv PATH 
/share/apps/openmpi/intel/1.4.1/bin:/usr/java/latest/bin:/share/apps/Modules/3.2.5/bin:/share/apps/intel/Compiler/11.0/083/bin/intel64:/usr/kerberos/bin:/usr/java/latest/bin:/opt/intel/fce/11.0.069/bin:/opt/intel/cce/11.0.069/bin:/opt/intel/clck/1.3:/bin:/usr/bin:/opt/ganglia/bin:/opt/ganglia/sbin:/opt/openmpi/bin/:/opt/maui/bin:/opt/torque/bin:/opt/torque/sbin:/opt/rocks/bin:/opt/rocks/sbin:/opt/toolworks/totalview.8.6.0-2/bin:/opt/ganglia/bin:/opt/ganglia/sbin:/opt/openmpi/bin/:/opt/maui/bin:/opt/torque/bin:/opt/torque/sbin:/opt/rocks/bin:/opt/rocks/sbin:/opt/toolworks/totalview.8.6.0-2/bin
setenv _LMFILES_ 
/share/apps/Modules/modulefiles/intel-compilers/11.0.083:/share/apps/Modules/3.2.5/modulefiles/modules:/share/apps/Modules/modulefiles/mkl/11.1.073:/share/apps/Modules/modulefiles/openmpi_intel64/1.4.1
set _exit=0
test 0 = 0
eval `/share/apps/Modules/$MODULE_VERSION/bin/modulecmd tcsh load 
fftw/3.2.2-double`
/share/apps/Modules/3.2.5/bin/modulecmd tcsh load fftw/3.2.2-double
setenv CPATH 
/share/apps/fftw/fftw-3.2.2/double/include:/share/apps/openmpi/intel/1.4.1/include:/share/apps/intel/Compiler/11.1/073/mkl/include
setenv FPATH 
/share/apps/fftw/fftw-3.2.2/double/include:/share/apps/openmpi/intel/1.4.1/include:/share/apps/intel/Compiler/11.1/073/mkl/include:/etc/ksh.fpath:/etc/ksh.fpath
setenv LD_LIBRARY_PATH 
/share/apps/fftw/fftw-3.2.2/double/lib:/opt/torque/lib64:/share/apps/openmpi/intel/1.4.1/lib:/share/apps/intel/Compiler/11.1/073/mkl/lib/em64t:/share/apps/intel/Compiler/11.0/083/lib/intel64:/opt/intel/fce/11.0.069/lib:/opt/intel/cce/11.0.069/lib
setenv LOADEDMODULES 
intel-compilers/11.0.083:modules:mkl/11.1.073:openmpi_intel64/1.4.1:fftw/3.2.2-double
setenv PATH 
/share/apps/fftw/fftw-3.2.2/double/bin:/share/apps/openmpi/intel/1.4.1/bin:/usr/java/latest/bin:/share/apps/Modules/3.2.5/bin:/share/apps/intel/Compiler/11.0/083/bin/intel64:/usr/kerberos/bin:/usr/java/latest/bin:/opt/intel/fce/11.0.069/bin:/opt/intel/cce/11.0.069/bin:/opt/intel/clck/1.3:/bin:/usr/bin:/opt/ganglia/bin:/opt/ganglia/sbin:/opt/openmpi/bin/:/opt/maui/bin:/opt/torque/bin:/opt/torque/sbin:/opt/rocks/bin:/opt/rocks/sbin:/opt/toolworks/totalview.8.6.0-2/bin:/opt/ganglia/bin:/opt/ganglia/sbin:/opt/openmpi/bin/:/opt/maui/bin:/opt/torque/bin:/opt/torque/sbin:/opt/rocks/bin:/opt/rocks/sbin:/opt/toolworks/totalview.8.6.0-2/bin
setenv _LMFILES_ 
/share/apps/Modules/modulefiles/intel-compilers/11.0.083:/share/apps/Modules/3.2.5/modulefiles/modules:/share/apps/Modules/modulefiles/mkl/11.1.073:/share/apps/Modules/modulefiles/openmpi_intel64/1.4.1:/share/apps/Modules/modulefiles/fftw/3.2.2-double
set _exit=0
test 0 = 0
mpirun -np 2 /RQusagers/sharmabh/backup/exe/Linux-x86-64-intel/cp2k.popt -i 
input.inp
--------------------------------------------------------------------------
MPI_ABORT was invoked on rank 0 in communicator MPI_COMM_WORLD
with errorcode 1.

NOTE: invoking MPI_ABORT causes Open MPI to kill all MPI processes.
You may or may not see output from other processes, depending on
exactly when Open MPI kills them.
--------------------------------------------------------------------------
--------------------------------------------------------------------------
mpirun has exited due to process rank 0 with PID 29138 on
node compute-0-73.local exiting without calling "finalize". This may
have caused other processes in the application to be
terminated by signals sent by mpirun (as reported here).
--------------------------------------------------------------------------
#########################################################################################################

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