[CP2K:4000] GTH BLYP and B3LYP basis sets and pseudopotentials for Fe
hut... at pci.uzh.ch
hut... at pci.uzh.ch
Wed Aug 29 07:25:35 UTC 2012
Hi
yes, that is a good idea. You should do some testing, but I
would try the MOLOPT DZVP SR basis sets.
Juerg
--------------------------------------------------------------
Juerg Hutter Phone : ++41 44 635 4491
Physical Chemistry Institute FAX : ++41 44 635 6838
University of Zurich E-mail: hut... at pci.uzh.ch
Winterthurerstrasse 190
CH-8057 Zurich, Switzerland
---------------------------------------------------------------
-----cp... at googlegroups.com wrote: -----
To: cp... at googlegroups.com
From: Lavinia
Sent by: cp... at googlegroups.com
Date: 08/29/2012 02:20AM
Subject: Re: [CP2K:4000] GTH BLYP and B3LYP basis sets and pseudopotentials for Fe
Dear Juerg,
Thank you so much for your reply. I have one more question. Would you recommend using only MOLOPT basis sets for all elements (Fe, H, C, N, O) for the heme protein calculations rather than a mix of a MOLOPT basis set for Fe and more diffuse GTH basis sets for the other elements?
Best regards,
Lavinia
On Tuesday, August 28, 2012 3:31:11 AM UTC-4, jgh wrote:Hi
there is currently no Fe B3LYP pseudopotential. Most people
would use the corresponding BLYP PP in such a case (and also
for all other elements in the calculation).
The best choice for a basis set is the MOLOPT series. You
can find them in BASIS_MOLOPT in tests/QS.
Finally, you could generate your own (B3LYP) pseudos and
basis sets using the atomic code that is part of CP2K.
Some examples can be found in tests/ATOM.
regards
Juerg
--------------------------------------------------------------
Juerg Hutter Phone : ++41 44 635 4491
Physical Chemistry Institute FAX : ++41 44 635 6838
University of Zurich E-mail: hut... at pci.uzh.ch
Winterthurerstrasse 190
CH-8057 Zurich, Switzerland
---------------------------------------------------------------
-----cp... at googlegroups.com wrote: -----
To: cp... at googlegroups.com
From: Lavinia
Sent by: cp... at googlegroups.com
Date: 08/28/2012 05:18AM
Subject: [CP2K:3995] GTH BLYP and B3LYP basis sets and pseudopotentials for Fe
Dear GTH,
I am preparing QM(DFT)/MM calculations for a chemical reaction catalyzed by an iron enzyme. I am interested in running the simulations both at BLYP and hybrid B3LYP level. While there is a Fe GTH optimized pseudopotential generated and available for the BLYP calculations in the CP2K database, there is no Fe basis set in the GTH_BASIS_SETS. Could you provide one? Can it be generated with the new ATOM BASIS_OPTIMIZATION codebase? Would you please address the same issue for B3LYP (BASIS/PSEUDOPOTENTIAL_OPTIMIZATION availability and accuracy)?
Thank you,
LC
--
You received this message because you are subscribed to the Google Groups "cp2k" group.
To view this discussion on the web visit https://groups.google.com/d/msg/cp2k/-/uXrQisPvBLEJ.
To post to this group, send email to cp... at googlegroups.com.
To unsubscribe from this group, send email to cp2k+... at googlegroups.com.
For more options, visit this group at http://groups.google.com/group/cp2k?hl=en.
--
You received this message because you are subscribed to the Google Groups "cp2k" group.
To view this discussion on the web visit https://groups.google.com/d/msg/cp2k/-/DLvA5JttgV4J.
To post to this group, send email to cp... at googlegroups.com.
To unsubscribe from this group, send email to cp2k+uns... at googlegroups.com.
For more options, visit this group at http://groups.google.com/group/cp2k?hl=en.
More information about the CP2K-user
mailing list