segmentation fault

[Nikita]

Hi Jörg,

thanks for your suggestion! But I had already tried this before
compilation, but the error occured all the same.
Maybe there are some other tricks to overcome this obstacle?

Thank you in advance,
Nikita

On Jul 22, 1:36 pm, Jörg Saßmannshausen <j.sassma... at ucl.ac.uk>
wrote:
> Hi Nikita,
>
> the intel compiler is notorious for doing segfaults.
>
> Have you tried:
>
> $ ulimit -s unlimited
>
> That might cure the problem.
>
> Regards
>
> Jörg
>
> On Friday 22 July 2011 10:13:53 Nikita wrote:
>
>
>
>
>
>
>
>
>
> > Dear CP2K users and developers,
>
> > I have recently compiled CP2K on our university cluster. But the
> > calculation failed with the following message:
> > ********************************************
> > --------------------------
> >  OPTIMIZATION STEP:      2
> >  --------------------------
> > forrtl: severe (174): SIGSEGV, segmentation fault occurred
> > Image              PC                Routine            Line
> > Source
> > cp2k.popt          0000000001195583  Unknown               Unknown
> > Unknown
> > cp2k.popt          000000000104A51A  Unknown               Unknown
> > Unknown
> > cp2k.popt          00000000004CEDA1  Unknown               Unknown
> > Unknown
> > cp2k.popt          000000000040E631  Unknown               Unknown
> > Unknown
> > cp2k.popt          00000000004096BE  Unknown               Unknown
> > Unknown
> > cp2k.popt          000000000040868C  Unknown               Unknown
> > Unknown
> > libc.so.6          00007FED46734CF4  Unknown               Unknown
> > Unknown
> > cp2k.popt          0000000000408599  Unknown               Unknown
> > Unknown
> > ************************************************
>
> > Could you suggest any solutions to my problem? By the way, here is my
> > arch file:
>
> > **********************************
> > INTEL_MKL = /opt/intel/mkl/10.2.4.032
> > INTEL_INC = $(INTEL_MKL)/include/fftw
> > INTEL_LIB = $(INTEL_MKL)/lib/em64t
>
> > CC       = mpicc
> > CPP      =
> > FC =  mpif90
> > LD = mpif90
> > AR       = /usr/bin/ar -r
> > DFLAGS   = -D__INTEL -D__FFTSG -D__parallel -D__SCALAPACK -D__BLACS -
> > D__FFTW3 -D__LIBINT  -D__HAS_NO_ISO_C_BINDING
> > CPPFLAGS = -C -traditional $(DFLAGS) -I$(INTEL_INC)
> > FCFLAGS  = $(DFLAGS) -I$(INTEL_INC) \
> >            -O2 -xW -funroll-loops -fpp -free -heap-arrays 64
> > LDFLAGS  = $(FCFLAGS) -I$(INTEL_INC) -i-static
> > LIBS     = -L$(INTEL_LIB) -lmkl_scalapack_lp64 -
> > lmkl_blacs_intelmpi_lp64 \
> >            -lmkl_intel_lp64 -lmkl_sequential -lmkl_core \
> >            /home/vakula/CP2K_NEW/fftw3_compiled/lib/libfftw3.a \
> >            /home/vakula/CP2K_NEW/cp2k/tools/hfx_tools/libint_tools/
> > libint_cpp_wrapper.o \
> >            /home/vakula/CP2K_NEW/libint_compiled/lib/libderiv.a \
> >            /home/vakula/CP2K_NEW/libint_compiled/lib/libint.a \
> >            -lstdc++
>
> > OBJECTS_ARCHITECTURE = machine_intel.o
> > ******************************
>
> > Thank you in advance,
> > Nikita Vakula
> > PhD student, Moscow State University
>
> --
> *************************************************************
> Jörg Saßmannshausen
> University College London
> Department of Chemistry
> Gordon Street
> London
> WC1H 0AJ
>
> email: j.sassma... at ucl.ac.uk
> web:http://sassy.formativ.net
>
> Please avoid sending me Word or PowerPoint attachments.
> Seehttp://www.gnu.org/philosophy/no-word-attachments.html