[CP2K:3421] Re: Thermostat regions in MD
Teodoro Laino
teodor... at gmail.com
Wed Aug 10 06:51:14 UTC 2011
you've forgotten a part of my quote:
> But the thermostat (type/temperature/coupling) has to be the same for all the regions (this is the reason why it cannot be repeated).
Moreover the regions have to cover the full system.
This means that: this (what you want to do) is not possible.
On Aug 10, 2011, at 3:36 AM, Philippe C. A. wrote:
> On Aug 9, 2:14 pm, Teodoro Laino <teodor... at gmail.com> wrote:
>> This is not possible. The region section is only specifying an ensemble of atoms in which the temperature is kept under control.
>
> This is exactly what I want. I want to specify an ensemble of atoms
> (say atoms 1 - 250) whose temperature is kept under control by the
> thermostat, and the atoms outside of that ensemble are unaffected by
> the thermostat.
> How do I do that for the Nose-Hoover thermostat? The input file
> section from my previous post apparently is wrong.
>
>>> &MOTION
>>> &MD
>>> ENSEMBLE NVT
>>> TEMPERATURE [K] 500.0
>>> &THERMOSTAT
>>> TYPE NOSE
>>> REGION DEFINED
>>> &DEFINE_REGION
>>> LIST 1 2 3 [...] 250 # My system has 250 particles A and 250
>>> particles B
>>> &END DEFINE_REGION
>>> &NOSE
>>> LENGTH 1
>>> TIMECON [fs] 1.0e-2
>>> &END NOSE
>>> &END THERMOSTAT
>>> TIMESTEP [fs] 1.0 fs
>>> STEPS 20
>>> &END MD
>>> &END MOTION
>
> --
> You received this message because you are subscribed to the Google Groups "cp2k" group.
> To post to this group, send email to cp... at googlegroups.com.
> To unsubscribe from this group, send email to cp2k+uns... at googlegroups.com.
> For more options, visit this group at http://groups.google.com/group/cp2k?hl=en.
>
More information about the CP2K-user
mailing list