Montecarlo
Francesco
francesc... at gmail.com
Tue Sep 14 16:38:35 UTC 2010
Hi to all,
I would like to use the CP2K-Montecarlo module in order to do a
conformational analysis test, with DFT.
In order to understand what to do, I have started with ethane (and
other small molecules), but any attempt failed till now. I've used the
file in the regtest as a template, but in the best case I obtained the
error attached below.
After some tests, it seems to me that the Number of molecule types
vary as the number of atoms: I tried also to define a psf file, but
with other errors. By the way with "CONN_FILE_FORMAT OFF" should
overcome this request. Or am I wrong?
Has anybody of you done something similar?
Any help will be appreciated.
Thanks in advance,
Francesco
--------------------------------------------------------------------------------
Number of molecule types 8
&MOLECULE sections found 1
*
*** ERROR in mc_types.F/mc_input_file_create ***
*
*** Did not find MOLECULE sections for every molecule in the
simulation ***
*** (make sure both input files have all
types) ***
----------------------------------------------------------------------------------
&FORCE_EVAL
METHOD Quickstep
&DFT
&MGRID
CUTOFF 100
&END MGRID
&QS
EXTRAPOLATION USE_PREV_WF
&END QS
&SCF
SCF_GUESS ATOMIC
&END SCF
&XC
&XC_FUNCTIONAL Pade
&END XC_FUNCTIONAL
&XC_GRID
XC_DERIV SPLINE2
XC_SMOOTH_RHO NONE
&END XC_GRID
&END XC
&END DFT
&SUBSYS
&CELL
ABC 5.04977 5.04977 5.04977
&END CELL
&COORD
C 0.000000 0.000000 0.000000
C 0.000000 0.000000 1.450000
H 1.026720 0.000000 1.812996
H -0.513360 0.889165 1.813000
H -0.513360 -0.889165 1.813000
H -1.026719 0.000000 -0.363000
H 0.513360 0.889165 -0.363000
H 0.513360 -0.889165 -0.363000
&END COORD
&KIND H
BASIS_SET DZVP-GTH-Pade
POTENTIAL GTH-BLYP-q1
&END KIND
&KIND C
BASIS_SET DZVP-GTH-Pade
POTENTIAL GTH-BLYP-q4
&END KIND
&TOPOLOGY
&MOL_SET
&MOLECULE
NMOL 1
CONN_FILE_FORMAT OFF
&END MOLECULE
&END MOL_SET
CONNECTIVITY MOL_SET
&END TOPOLOGY
&END SUBSYS
&END FORCE_EVAL
&GLOBAL
PROJECT ethane_MC
RUN_TYPE MC
PRINT_LEVEL LOW
&END GLOBAL
&MOTION
&MC
IUPTRANS 6400000
IUPVOLUME 3200000
LBIAS no
LSTOP yes
NMOVES 8
NSTEP 2
PMSWAP 0.0
PMTRAION 0.00
PMTRANS 0.00
PMVOLUME 1.00
PMVOL_BOX 1.00
PRESSURE 1.013
ENSEMBLE traditional
RESTART no
RESTART_FILE_NAME mc_restart_1
RMDIHEDRAL 3.0
RMANGLE 3.0
RMBOND 0.074
RMROT 26.0
RMTRANS 0.38
RMVOLUME 0.5
TEMPERATURE 398.0
AVBMC_RMIN 1.0
AVBMC_RMAX 5.0
AVBMC_ATOM 1
PBIAS 0.5
ETA 0.0
PMAVBMC_MOL 1.0
PMSWAP_MOL 1.0
PMROT_MOL 1.0
PMTRANS_MOL 1.0
PMTRAION_MOL 1.0
VIRIAL_TEMPS 300.0
&END MC
&END MOTION
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