NaNs in wave function cube files
mguidon
manuel... at gmail.com
Thu Nov 19 15:45:34 UTC 2009
Hi Claudio.
Does the problem also occur if you run with appropriate periodic
settings (i.e. correct box size and correct cutoff radius for the
truncated Coulomb operator) ?
What about a pure GGA calculation without HFX. Does this work?
Manuel
On Nov 19, 1:36 pm, Claudio <marg... at gmail.com> wrote:
> BTW, I noticed there are no NaNs with 3-21g* instead.
>
> Any ideas?
>
> Thanks!
>
> Claudio
>
> On Nov 18, 3:56 am, Claudio <marg... at gmail.com> wrote:
>
> > Dear all, thanks for your help trying to run periodic b3lyp.
>
> > Though my run appears to converge, it writes seemingly correct density
> > and spin cubes, wave function cubes are filled with NaNs after the
> > geometry block. A typical input file that will generate this errors
> > follows. The version of CP2K is yesterday's CVS. An older version
> > from a month ago also does this.
>
> > &FORCE_EVAL
> > METHOD Quickstep
> > &DFT
> > LSD
> > CHARGE -1
> > MULTIPLICITY 2
> > BASIS_SET_FILE_NAME /home/claudiom/src/cp2k/tests/QS/
> > EMSL_BASIS_SETS
> > POTENTIAL_FILE_NAME /home/claudiom/src/cp2k/tests/QS/POTENTIAL
> > &MGRID
> > ! CUTOFF 200
> > ! REL_CUTOFF 50
> > &END MGRID
> > &QS
> > METHOD GAPW
> > EPS_PGF_ORB 1.0E-16
> > &END QS
> > &PRINT
> > &MO_CUBES
> > NHOMO 5
> > NLUMO 5
> > &END
> > &E_DENSITY_CUBE
> > &END
> > &END PRINT
> > &SCF
> > EPS_SCF 1.0E-4
> > SCF_GUESS RESTART
> > MAX_SCF 60
> > &OT
> > &END OT
> > &OUTER_SCF
> > MAX_SCF 1
> > &END OUTER_SCF
> > &END SCF
> > #These are the coefficients used for B3LYP using VWN3, this is the
> > default Gaussian definition, but not recommended
> > &XC
> > &XC_FUNCTIONAL
> > &LYP
> > SCALE_C 0.81
> > &END LYP
> > &BECKE88
> > SCALE_X 0.72
> > &END BECKE88
> > &VWN
> > FUNCTIONAL_TYPE VWN3
> > SCALE_C 0.19
> > &END VWN
> > &XALPHA
> > SCALE_X 0.08
> > &END XALPHA
> > &END XC_FUNCTIONAL
> > &HF
> > &SCREENING
> > EPS_SCHWARZ 1.0E-10
> > SCREEN_ON_INITIAL_P FALSE
> > &END SCREENING
> > &INTERACTION_POTENTIAL
> > POTENTIAL_TYPE TRUNCATED
> > CUTOFF_RADIUS 15.000
> > T_C_G_DATA /home/claudiom/src/cp2k/tests/QS/t_c_g.dat
> > &END INTERACTION_POTENTIAL
> > &MEMORY
> > MAX_MEMORY 768
> > EPS_STORAGE_SCALING 1.0E-1
> > &END MEMORY
> > FRACTION 0.20
> > &END HF
> > &END XC
> > &END DFT
> > &SUBSYS
> > &CELL
> > ABC 31.000 31.000 31.000
> > PERIODIC XYZ
> > &END CELL
> > &COORD
> > C 2.724300 -0.210525 1.679657
> > N 3.378813 0.142337 0.367635
> > C 2.628981 -0.547029 -0.747413
> > C 3.308675 1.641065 0.186405
> > C 4.824483 -0.335730 0.427386
> > C 5.707747 0.076171 -0.750114
> > C 7.039619 -0.686925 -0.723046
> > N -2.115674 0.098149 0.566927
> > S -1.065879 1.188462 -0.004405
> > O -0.096986 1.688012 0.992480
> > O -0.543935 0.938005 -1.360293
> > S -1.679594 -1.425080 0.861473
> > O -0.223810 -1.659926 0.878041
> > O -2.517197 -1.975152 1.928867
> > C -2.318886 2.581971 -0.206516
> > C -2.273741 -2.356150 -0.672280
> > F -3.277763 2.255810 -1.085288
> > F -1.666785 3.662915 -0.676494
> > F -2.893950 2.911808 0.957784
> > F -2.046785 -3.675730 -0.512894
> > F -1.628775 -1.949980 -1.775445
> > F -3.592764 -2.180301 -0.862609
> > H 3.269846 0.294602 2.481570
> > H 2.778648 -1.293048 1.815246
> > H 1.683606 0.110359 1.652541
> > H 1.595470 -0.201469 -0.749459
> > H 2.666731 -1.624615 -0.575470
> > H 3.104631 -0.308923 -1.698754
> > H 3.927011 2.115369 0.954315
> > H 2.265541 1.948040 0.284571
> > H 3.693613 1.904240 -0.800118
> > H 4.768472 -1.425574 0.513280
> > H 5.238050 0.053710 1.365517
> > H 5.910151 1.153814 -0.709845
> > H 5.210145 -0.119752 -1.706544
> > H 7.575766 -0.520996 0.219045
> > H 6.886641 -1.766428 -0.838317
> > H 7.681022 -0.342145 -1.545307
> > &END COORD
> > &KIND H
> > BASIS_SET 6-31Gxx
> > POTENTIAL ALL
> > &END KIND
> > &KIND F
> > BASIS_SET 6-31Gxx
> > POTENTIAL ALL
> > &END KIND
> > &KIND C
> > BASIS_SET 6-31Gxx
> > POTENTIAL ALL
> > &END KIND
> > &KIND N
> > BASIS_SET 6-31Gxx
> > POTENTIAL ALL
> > &END KIND
> > &KIND S
> > BASIS_SET 6-31Gxx
> > POTENTIAL ALL
> > &END KIND
> > &KIND O
> > BASIS_SET 6-31Gxx
> > POTENTIAL ALL
> > &END KIND
> > &END SUBSYS
> > &END FORCE_EVAL
> > &GLOBAL
> > PROJECT HF-ion-pair
> > PRINT_LEVEL MEDIUM
> > RUN_TYPE ENERGY
> > ECHO_INPUT
> > &END GLOBAL
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