cp2k on CRAY-XT5 rosa
vweber
valer... at hotmail.com
Sat Nov 7 12:48:31 UTC 2009
Hi Carlo
Running your input (only the first 6 SCF step) on blanc (16 prcs) gave
me the following timings
655.19 s (cp2k from 17.8.09)
692.53 s (cp2k from 6.11.09)
there is clearly a slow down in the dbcsr_sm_fm_multiply that we are
working on.
I suggest you to use the other OT which is faster, i.e.
&OT
PRECONDITIONER FULL_SINGLE_INVERSE
ALGORITHM IRAC
ORTHO_IRAC CHOL
EPS_IRAC_SWITCH 0.0E0
MINIMIZER CG
&END
with that I get
602.71 s (cp2k from 6.11.09)
... even with about 40 s slowdown in the dbcsr_sm_fm_multiply routine.
V
On Nov 6, 10:31 am, carlo antonio pignedoli <c.pig... at gmail.com>
wrote:
> Dear all,
> I use cp2k on the CRAY-XT5 of CSCS in Manno.
>
> Yesterday I recompiled the program and i noticed a considerable slowing down
> for GPW.
>
> I was running
> **** **** ****** ** PROGRAM STARTED AT Thu Nov 5 11:26:04
> 200
> CP2K| version string: CP2K version 2.0.1 (Development
> Version)
> CP2K| is freely available fromhttp://cp2k.berlios.de/
> CP2K| Program compiled at Wed Jul 1 22:46:48 CEST
> 2009
> CP2K| Program compiled on
> rosa3
> CP2K| Program compiled for
> CRAY-XT5
>
> Compiled with the CRAY-XT5.popt included in the sistribution and with
> module swap PrgEnv-pgi/2.2.41 PrgEnv-pathscale/2.2.21A
> module load fftw/3.2.2
>
> ~400 atoms on 128 cores ABC [angstrom] 23.50847160 22.621037531168 30
> &FORCE_EVAL
> METHOD Quickstep
> &DFT
> BASIS_SET_FILE_NAME ../BASIS_MOLOPT
> POTENTIAL_FILE_NAME ../GTH_POTENTIALS
> RESTART_FILE_NAME ./DH-RESTART.wfn
> &QS
> METHOD GPW
> EXTRAPOLATION ASPC
> EXTRAPOLATION_ORDER 3
> &END QS
> &MGRID
> CUTOFF 280
> NGRIDS 5
> &END
> &SCF
> MAX_SCF 30
> SCF_GUESS RESTART
> EPS_SCF 2.0E-6
> &OT
> PRECONDITIONER FULL_SINGLE_INVERSE
> MINIMIZER CG
> &END
> &OUTER_SCF
> MAX_SCF 15
> EPS_SCF 2.0E-6
> &END
>
> 1 OT CG 0.15E+00 28.3 0.00001269 -17545.3799531547
> -1.75E+04
> 2 OT LS 0.11E+00 4.6 1.00000000 -17545.3801164098
> -1.63E-04
> 3 OT CG 0.11E+00 11.4 0.00001158 -17545.3801385692
> -2.22E-05
>
> I updated and compiled again with CRAY-XT5.popt and now I get, for the same
> run
>
> **** **** ****** ** PROGRAM STARTED AT 2009-11-05
> 17:43:03.925
> CP2K| version string: CP2K version 2.1.61 (Development
> Version)
> CP2K| is freely available fromhttp://cp2k.berlios.de/
> CP2K| Program compiled at Thu Nov 5 15:54:57 CET
> 2009
> CP2K| Program compiled on
> rosa3
> CP2K| Program compiled for
> CRAY-XT5
>
> 1 OT CG 0.15E+00 41.7 0.00001164 -17545.3823332203
> -1.75E+04
> 2 OT LS 0.12E+00 6.7 -17545.3824862257
> 3 OT CG 0.12E+00 15.4 0.00000988 -17545.3824983556
> -1.65E-04
>
> Was there any major change in the code or should I check with the system
> management if
> something changed in the libraries installed on the machine?
>
> Thanks a lot for your help
>
> Carlo
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