[CP2K:1798] Re: molecule falling apart during md run
Teodoro Laino
teodor... at gmail.com
Wed Feb 25 10:32:01 UTC 2009
Dear Abu,
After 20 seconds of rutime.. I see this behavior:
SCF WAVEFUNCTION OPTIMIZATION
Step Update method Time Convergence Total
energy
-----------------------------------------------------------------------------
1 Mixing/Diag. 0.40E+00 2.069 294.5038702280
-329.5423433821
2 Mixing/Diag. 0.40E+00 3.080 159.4206153201
-329.1328110607
3 Mixing/Diag. 0.40E+00 3.120 105.4668986783
-328.0498845729
4 Mixing/Diag. 0.40E+00 3.182 1095.2138736182
-319.1742682576
5 Mixing/Diag. 0.40E+00 3.271 3261.5549040157
-293.8773371347
6 Mixing/Diag. 0.40E+00 3.207 743.4708241420
-265.4738605357
7 Mixing/Diag. 0.40E+00 3.259 453.2710960401
-280.2406017615
8 Mixing/Diag. 0.40E+00 3.213 174.2535774355
-277.2695854146
9 Mixing/Diag. 0.40E+00 3.304 2405.2506058034
-272.8353211907
10 Mixing/Diag. 0.40E+00 3.304 1820.7298891716
-267.0406646300
11 Mixing/Diag. 0.40E+00 3.082 1033.7945891346
-270.2292200792
12 Mixing/Diag. 0.40E+00 3.171 1342.9047137583
-263.2869416906
13 Mixing/Diag. 0.40E+00 3.268 1397.7632067855
-269.6408037154
14 Mixing/Diag. 0.40E+00 3.199 1438.4026792467
-262.5345384047
15 Mixing/Diag. 0.40E+00 3.241 747.2931276111
-268.6729157993
16 Mixing/Diag. 0.40E+00 3.141 981.6542877413
-262.7054740768
17 Mixing/Diag. 0.40E+00 3.202 1071.2871648587
-268.3759861758
there's no need to go further..
Your wavefunction is never converging!!!!!!!!! If it does not converge
the forces are wrong and the system, most of the times, explodes..
Please have a look at OT, if you want to converge more easily. There are
plenty of input files in the
test directory of CP2K (benchmark directory for example).
Anyway my suggestion is that you still need to play a bit more with the
code.
If the molecule is "falling apart", it is because the number you get are
trash.
Cheers
Teo
Abu Naser wrote:
> Hi Teo,
>
> Yes, I did have the molecule. I did not include to save space. The
> molecule was:
> Ni 14.16100 1.65400 10.32900
> P 12.82300 3.32000 10.20200
> P 15.64100 2.85600 11.32900
> P 13.47400 -0.09700 11.35800
> P 14.40000 0.51500 8.50300
> C 11.04600 3.24300 10.66700
> C 10.33000 2.10500 10.28800
> C 8.99600 1.94300 10.65100
> C 8.35700 2.91900 11.40000
> C 9.05700 4.05200 11.79100
> C 10.39000 4.21600 11.42000
> C 12.75600 4.30400 8.63800
> C 11.59700 4.89500 8.12600
> C 11.63200 5.62800 6.94200
> C 12.81700 5.79300 6.25100
> C 13.97800 5.21600 6.74500
> C 13.93800 4.47300 7.91500
> C 13.47300 4.61100 11.37600
> C 15.00700 4.60600 11.32400
> C 15.90400 2.54400 13.14100
> C 16.84800 3.44000 13.92400
> C 17.35900 3.16600 10.72700
> C 18.23400 1.91400 10.69200
> C 11.93700 -0.12700 12.36000
> C 11.70200 0.96500 13.19900
> C 10.52600 1.06400 13.93800
> C 9.55600 0.08300 13.82800
> C 9.76200 -1.00500 13.00000
> C 10.95000 -1.11900 12.27500
>
> With regards,
>
> Abu
>
> 2009/2/25 Teodoro Laino <teodor... at gmail.com
> <mailto:teodor... at gmail.com>>
>
>
> Dear Abu,
> I wander if you have a molecule at all ?!
> Why is the coordinate section empty?
>
> please before posting read carefully this post:
> http://groups.google.com/group/cp2k/web/general-rules-for-posting-help-requests
>
> Teo
>
> Abu Naser wrote:
> > Hi All,
> >
> > I have been playing around with cp2k. When I run an MD simulation
> > using the following input file- molecule is falling apart.
> > I have been wondering where could be problem.
> >
> > With regard,
> >
> > Abu
> >
> >
> ##############################################################################
> > &FORCE_EVAL
> > METHOD Quickstep
> > &DFT
> > &MGRID
> > CUTOFF 300
> > &END MGRID
> > &QS
> > &END QS
> > &SCF
> > SCF_GUESS ATOMIC
> > &END SCF
> > &XC
> > &XC_FUNCTIONAL Pade
> > &END XC_FUNCTIONAL
> > &END XC
> > &END DFT
> > &SUBSYS
> > &CELL
> > ABC 10.0 10.0 10.0
> > UNIT ANGSTROM
> > &END CELL
> > &COORD
> >
> > &END COORD
> > &KIND H
> > BASIS_SET DZVP-GTH-PADE
> > POTENTIAL GTH-PADE-q1
> > &END KIND
> > &KIND C
> > BASIS_SET DZVP-GTH-PADE
> > POTENTIAL GTH-PADE-q4
> > &END KIND
> > &KIND P
> > BASIS_SET DZVP-GTH-PADE
> > POTENTIAL GTH-PADE-q5
> > &END KIND
> > &KIND Ni
> > BASIS_SET DZV-GTH-PADE-CONFINED
> > POTENTIAL GTH-PADE-q18
> > &END KIND
> > &END SUBSYS
> > &END FORCE_EVAL
> > &GLOBAL
> >
> > PROJECT hop
> > RUN_TYPE MD
> > PRINT_LEVEL MEDIUM
> > &END GLOBAL
> > &MOTION
> > &MD
> > ENSEMBLE NVE
> > STEPS 20000
> > TIMESTEP 0.05
> > TEMPERATURE 300.0
> > &END MD
> > &END MOTION
> >
> >
> ############################################################################
> > >
>
>
>
>
>
> >
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