[CP2K:2436] Pure semiempirical calculation
Laino Teodoro
teodor... at gmail.com
Wed Dec 2 23:51:59 UTC 2009
Dear Shihao,
your input file is using a cutoff interaction for the coulomb/
exchange terms of the semi-empirical hamiltonians: this is the source
of the non-conserved total energy and of the increased temperature.
A fully periodic version (with long-range terms for coulomb
interactions) is still not yet working.
Regards,
Teo
On 3 Dec 2009, at 00:45, shihao wrote:
> Dear all,
>
> I'm trying to run semiempirical calculations using CP2K. The system
> has 250 water molecules and uses PBC and NVT ensemble (298.15K). I
> did test runs for only a few time steps and found that the conserved
> quantity is not well conserved and the temperature keeps increasing
> rapidly (goes up to 2000K). The input file is attached. Does anyone
> have any ideas on what the problem is? Any help will be appreciated.
>
> Thanks
> Shihao
>
>
> &GLOBAL
> PROGRAM_NAME CP2K
> PROJECT_NAME wt_bk_01
> RUN_TYPE MD
> SEED 1000
> PREFERRED_FFT_LIBRARY FFTW
> PRINT_LEVEL LOW
> SAVE_MEM
> &END GLOBAL
>
> &MOTION
> &MD
> ENSEMBLE NVT
> STEPS 2000
> TIMESTEP 0.50
> TEMPERATURE 298.15
> &THERMOSTAT
> TYPE NOSE
> REGION GLOBAL
> &NOSE
> LENGTH 3
> YOSHIDA 3
> TIMECON 100
> MTS 2
> &END NOSE
> @INCLUDE run_cp2k.tr1
> &END THERMOSTAT
> &THERMAL_REGION
> @INCLUDE run_cp2k.tr2
> &PRINT
> &TEMPERATURE
> &EACH
> MD 20
> &END EACH
> &END TEMPERATURE
> &END PRINT
> &END THERMAL_REGION
> &PRINT
> &ENERGY
> &EACH
> MD 20
> &END EACH
> &END ENERGY
> &END PRINT
> &END MD
>
> &PRINT
> &RESTART
> &EACH
> MD 20
> &END EACH
> &END RESTART
> &RESTART_HISTORY OFF
> &END RESTART_HISTORY
>
> &TRAJECTORY SILENT
> FORMAT DCD
> &EACH
> MD 20
> &END EACH
> &END TRAJECTORY
> &VELOCITIES OFF
> &END VELOCITIES
> &FORCES OFF
> &END FORCES
> &END PRINT
> &END MOTION
>
> &FORCE_EVAL
> &DFT
> &SCF
> SCF_GUESS ATOMIC
> EPS_SCF 1.0E-6
> MAX_SCF 50
> &OUTER_SCF
> EPS_SCF 1.0E-6
> MAX_SCF 10
> &END OUTER_SCF
> &OT
> PRECONDITIONER NONE
> MINIMIZER DIIS
> N_DIIS 7
> &END OT
> &PRINT
> &RESTART
> &EACH
> MD 20
> &END EACH
> &END RESTART
> &RESTART_HISTORY OFF
> &END RESTART_HISTORY
> &END PRINT
> &END SCF
>
> &QS
> METHOD AM1
> EPS_DEFAULT 1.0E-12
> EXTRAPOLATION PS
> EXTRAPOLATION_ORDER 3
> &SE
> &END SE
> &END QS
> &MGRID
> COMMENSURATE
> CUTOFF 280
> &END MGRID
> &POISSON
> POISSON_SOLVER PERIODIC
> PERIODIC XYZ
> &END POISSON
>
> &PRINT
> &E_DENSITY_CUBE
> &EACH
> MD 20
> &END EACH
> &END E_DENSITY_CUBE
> &END PRINT
> &END DFT
>
> &SUBSYS
> &CELL
> ABC 19.574 19.574 19.574
> PERIODIC XYZ
> &END CELL
> &TOPOLOGY
> COORDINATE PDB
> COORD_FILE_NAME ./run_cp2k.pdb
> PARA_RES T
> &END TOPOLOGY
> &KIND O
> &END KIND
> &KIND H
> &END KIND
> &END SUBSYS
> &END FORCE_EVAL
>
> --
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