[CP2K:2224] Re: Mulliken charge problem
Teodoro Laino
teodor... at gmail.com
Wed Aug 12 08:36:42 UTC 2009
If you would explain properly what is your problem.. than you may
possibly have more chances of getting a reply!
What is the problem?
- Is the problem that a and b both for PBE or BLY differ by 0.002 Angstrom
or
- is the problem that PBE and BLYP give different results
or
- is the problem that both PBE and BLYP are totally off compared to the
experimental value
??
About the problem of not getting b=3^0.5*a for orthorombic keep in mind
that cell optimization suffer like all optimization of
finding local minima.. if your starting geometry/cell is particularly
wrong you may easily end-up with an high energy local minima.
Teo
obo wrote:
> Nobody here who can help me?
>
> On 11 Aug., 11:10, obo <bo... at matcalc.de> wrote:
>
>> thank you!
>> these Basis Sets works better. the error with the poisson and the
>> cholesky error is vanished.
>> but I think the relaxation of the cell is still wrong. after
>> relaxation of the hexagonal cell, the two vector have not the same
>> length. with the pbe functional the lengths are only a=4.816 b=4.818
>> aangstrom and with the BLYP 4.845 and 4.847!!!
>> The biggest variation is in the O-Si-O angles, which range from 105°
>> to 115°!
>> The problem with the orthorhombic cell is still present. The relation
>> b=3^0.5*a is not fulfilled and so the Mulliken charges are also wrong.
>> For example I've got the following charges:
>>
>> Atom | Charge
>>
>> 1 Si 0.957166
>> 2 Si 0.955747
>> 3 Si 0.919798
>> 4 O -0.467908
>> 5 O -0.488780
>> 6 O -0.459461
>> 7 O -0.473715
>> 8 O -0.454923
>> 9 O -0.487922
>> 10 Si 0.957148
>> 11 Si 0.955763
>> 12 Si 0.919796
>> 13 O -0.467886
>> 14 O -0.488787
>> 15 O -0.459514
>> 16 O -0.473733
>> 17 O -0.454871
>> 18 O -0.487918
>> Total 0.000000
>>
>> On 10 Aug., 09:11, Matthias <matthia... at psi.ch> wrote:
>>
>>
>>> cp2k/tests/QS/BASIS_MOLOPT
>>>
>>> Matthias
>>>
>>> On Aug 10, 9:05 am, obo <bo... at matcalc.de> wrote:
>>>
>>>> thanks for your answer.
>>>> do you know where i can download a BASIS SET file with these MOLOPT
>>>> basis sets?
>>>>
>>>> Oliver
>>>>
>>>> On 10 Aug., 09:01, Matthias <matthia... at psi.ch> wrote:
>>>>
>>>>> The overlap matrix for such basis sets becomes ill-conditioned. Please
>>>>> note, augmented basis sets as employed for molecular systems are
>>>>> usually not suited for condensed systems and shouldn't be used for
>>>>> such systems. You may try the MOLOPT basis sets e.g. DZVP-MOLOPT-SR-
>>>>> GTH-q4 for Si and DZVP-MOLOPT-SR-GTH-q6 for O for your quartz systems.
>>>>>
>>>>> Matthias
>>>>>
>>>>> On Aug 10, 8:39 am, obo <bo... at matcalc.de> wrote:
>>>>>
>>>>>> I have tested different Basis Sets. With confined Basis Sets the
>>>>>> problem becomes better but there is a difference anymore.
>>>>>> With an augment Basis Set I get the following error:
>>>>>>
>>>>>> *** 08:35:30 ERRORL2 in cp_fm_cholesky:cp_fm_cholesky_decompose
>>>>>> err=-300 ***
>>>>>> *** condition FAILED at line 92
>>>>>>
>>>>>> I have reada about linear dependences in the BASIS SET. Can somebody
>>>>>> explain me what this means?
>>>>>> thanks
>>>>>> Oliver
>>>>>>
>>>>>> On 3 Aug., 10:23, obo <bo... at matcalc.de> wrote:
>>>>>>
>>>>>>> Dear cp2k Users,
>>>>>>> I've made some calculations with alpha quarz. At first I have
>>>>>>> optimized the hexagonal cell with 9 atoms. I've got the initial
>>>>>>> coordinates from a cell optimization in another ab initio programm.
>>>>>>> The relaxation in cp2k was sucessfull and the mulliken charges from
>>>>>>> the Si atoms are approximately the same. Now I have constructed an
>>>>>>> orthorhombic cell with 19 atoms. I've constructed the basis from the
>>>>>>> coordinates of the relaxed hexagonal cell. The length of the cell
>>>>>>> vectors are also calculated from the hexagonal cell vectors(a, 3^0.5,
>>>>>>> c).
>>>>>>> When I start the cell optimization, I get the following mulliken
>>>>>>> charges:
>>>>>>> Atom | Charge
>>>>>>> 1 Si 1.370421
>>>>>>> 2 Si 1.349422
>>>>>>> 3 Si 0.726644
>>>>>>> 4 O -0.611734
>>>>>>> 5 O -0.644209
>>>>>>> 6 O -0.595641
>>>>>>> 7 O -0.609976
>>>>>>> 8 O -0.586622
>>>>>>> 9 O -0.647799
>>>>>>> 10 Si 1.473611
>>>>>>> 11 Si 1.489633
>>>>>>> 12 Si 0.829598
>>>>>>> 13 O -0.609031
>>>>>>> 14 O -0.568553
>>>>>>> 15 O -0.591643
>>>>>>> 16 O -0.610546
>>>>>>> 17 O -0.600818
>>>>>>> 18 O -0.562758
>>>>>>> Total 0.000000
>>>>>>>
>>>>>>> At the end of the cell optimization, the relation between the cell
>>>>>>> vectors (a and 3^0.5*a) are also wrong.
>>>>>>> What is my mistake??? Can somebody help me?
>>>>>>>
>>>>>>> The input file:
>>>>>>>
>>>>>>> &FORCE_EVAL
>>>>>>> METHOD Quickstep
>>>>>>> STRESS_TENSOR NUMERICAL
>>>>>>> &DFT
>>>>>>> &POISSON
>>>>>>> PERIODIC XYZ
>>>>>>> POISSON_SOLVER PERIODIC
>>>>>>> &EWALD
>>>>>>> EWALD_TYPE SPME
>>>>>>> &END
>>>>>>> &END POISSON
>>>>>>> &MGRID
>>>>>>> CUTOFF 650
>>>>>>> RELATIVE_CUTOFF 85.0
>>>>>>> &END MGRID
>>>>>>> &QS
>>>>>>> WF_INTERPOLATION PS
>>>>>>> EXTRAPOLATION_ORDER 4
>>>>>>> &END QS
>>>>>>> &SCF
>>>>>>> EPS_SCF 1.E-6
>>>>>>> CHOLESKY OFF
>>>>>>> MAX_SCF 50
>>>>>>> SCF_GUESS ATOMIC
>>>>>>> &OUTER_SCF
>>>>>>> DIIS_BUFFER_LENGTH 5
>>>>>>> OPTIMIZER DIIS
>>>>>>> &END OUTER_SCF
>>>>>>> &END SCF
>>>>>>> &XC
>>>>>>> &XC_GRID
>>>>>>> XC_DERIV SPLINE3
>>>>>>> &END XC_GRID
>>>>>>> &XC_FUNCTIONAL PBE
>>>>>>> &END XC_FUNCTIONAL
>>>>>>> &END XC
>>>>>>> &END DFT
>>>>>>> &SUBSYS
>>>>>>> &CELL
>>>>>>> PERIODIC XYZ
>>>>>>> MULTIPLE_UNIT_CELL 1 1 1
>>>>>>> ABC 4.805 8.3225 5.393
>>>>>>> ALPHA_BETA_GAMMA 90.0 90.0 90.0
>>>>>>> &END CELL
>>>>>>> &COORD
>>>>>>> Si 1.1328078594000004 6.4061604696 3.5954303785000006
>>>>>>> Si 1.1329589190000002 1.9039591092000003 1.7978168006000006
>>>>>>> Si 2.6289910789000004 8.3163249591 5.3929132817
>>>>>>> O 1.6426232969999999 7.8451213509999995 4.154876766399999
>>>>>>> O 4.4371215705 1.6255884538000005 2.3576057410000004
>>>>>>> O 3.6202186447 7.155568958499999 0.5597043610000001
>>>>>>> O 1.6427913173999997 0.4650789015000002 1.237976828999999
>>>>>>> O 3.620111714099999 1.1547964305000002 4.8334310334
>>>>>>> O 4.4368490245 6.684213627799998 3.035570217399999
>>>>>>> Si 3.4358078594 2.2346604696 3.5954303785000006
>>>>>>> Si 3.435958918999999 6.054959109200001 1.7978168006000006
>>>>>>> Si 0.1269910789 4.144824959099999 5.3929132817
>>>>>>> O 3.9456232970000005 3.6736213510000013 4.154876766399999
>>>>>>> O 1.9351215704999998 5.776588453800002 2.3576057410000004
>>>>>>> O 1.1182186447000002 2.984068958500001 0.5597043610000001
>>>>>>> O 3.9457913174000008 4.616078901500002 1.237976828999999
>>>>>>> O 1.1181117141 5.305796430500002 4.8334310334
>>>>>>> O 1.9348490245 2.5127136278000006 3.035570217399999
>>>>>>> &END COORD
>>>>>>> &KIND Si
>>>>>>> BASIS_SET DZVP-GTH-PBE
>>>>>>> POTENTIAL GTH-PBE-q4
>>>>>>> &END KIND
>>>>>>> &KIND O
>>>>>>> BASIS_SET DZVP-GTH-PBE
>>>>>>> POTENTIAL GTH-PBE-q6
>>>>>>> &END KIND
>>>>>>> &KIND H
>>>>>>> BASIS_SET DZVP-GTH-PBE
>>>>>>> POTENTIAL GTH-PBE-q1
>>>>>>> &END KIND
>>>>>>> &TOPOLOGY
>>>>>>> CENTER_COORDINATES T
>>>>>>> &DUMP_PDB
>>>>>>> &END
>>>>>>> MULTIPLE_UNIT_CELL 1 1 1
>>>>>>> &END TOPOLOGY
>>>>>>> &END SUBSYS
>>>>>>> &END FORCE_EVAL
>>>>>>> &GLOBAL
>>>>>>> PROJECT SiO-Cell
>>>>>>> RUN_TYPE CELL_OPT
>>>>>>> PRINT_LEVEL MEDIUM
>>>>>>> &END GLOBAL
>>>>>>> &MOTION
>>>>>>> &GEO_OPT
>>>>>>> MAX_ITER 200
>>>>>>> OPTIMIZER BFGS
>>>>>>> MAX_FORCE 5.0E-5
>>>>>>> &END GEO_OPT
>>>>>>> &CELL_OPT
>>>>>>> EXTERNAL_PRESSURE [bar] 0.0
>>>>>>> PRESSURE_TOLERANCE 15.0
>>>>>>> MAX_ITER 900
>>>>>>> KEEP_ANGLES TRUE
>>>>>>> OPTIMIZER CG
>>>>>>> &CG
>>>>>>> &LINE_SEARCH
>>>>>>> TYPE 2PNT
>>>>>>> &END LINE_SEARCH
>>>>>>> &END CG
>>>>>>> &END CELL_OPT
>>>>>>> &END MOTION
>>>>>>>
>>>>>>> thanks
>>>>>>> Oliver
>>>>>>>
> >
>
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