[CP2K:1204] cannot restart from restart file
Teodoro Laino
teodor... at gmail.com
Fri Jul 18 20:17:56 UTC 2008
Ciao Csilla,
I downloaded your input file.. and as you said I run it for 5 steps
and everything was ok.
I restarted it and everything was ok for other 5 steps (didn't check
further.. but if I understood
properly it was enough just 1 restart.. right?) both using the
&EXT_RESTART section and
using the restart file directly as an input file.
I attach a .tgz as a body of evidence ;-)..
I suspect your cp2k is miscompiled.
Ciao,
Teo
-------------- next part --------------
A non-text attachment was scrubbed...
Name: csilla_1.tgz
Type: application/octet-stream
Size: 197266 bytes
Desc: not available
URL: <https://lists.cp2k.org/archives/cp2k-user/attachments/20080718/eb83aedd/attachment.obj>
-------------- next part --------------
On 18 Jul 2008, at 18:46, Csilla Varnai wrote:
> Dear All,
>
> Unfortunately it's happened recently quite often that my jobs are
> killed due to last minute-announced updates etc. I'm trying to restart
> it from the saved restart files, but I can't, because during the MD
> simulation some atoms move too close to one another, and CP2K aborts
> during the neighbour list building.
>
> Here's a file I used to test if I could restart the calculation. I
> performed 5 steps and then I tried to run the restart files to see if
> I could get the same trajectory.
> When I try to run any of the saved restart files, the program aborts
> immediately (see error message below). I checked the geometry, and the
> atoms are closer than the threshold. If I increase the EMAX_SPLINE,
> the temperature goes up to > 100 000 K and aborts with basically the
> same error message.
> However, running the original input file (please find attached), I
> don't even get warning messages, although the atoms get closer than
> the threshold for the spline construction.
> What's the difference in the 2 cases and why can't I obtain the same
> trajectory? I would expect to be able to. Am I wrong?
> I would really appreciate if anyone could help me!
>
> Thanks very much,
>
> Csilla
>
> KINETIC ENERGY[hartree] = 0.522663555689E+02
> 0.541626244398E+02
> TEMPERATURE[K] = 115820.281
> 120022.341
>
> **********************************************************************
> *********
>
> WARNING| Particles: 58 30 at distance [au]: 1.20668842
> less than: 1.36797301; increase EMAX_SPLINE.
>
> *
> *** ERROR in build_neighbor_lists ***
> *
>
> *** GEOMETRY wrong or EMAX_SPLINE too small! ***
>
> ===== Routine Calling Stack =====
>
> 7 build_neighbor_lists
> 6 build_fist_neighbor_lists
> 5 list_control
> 4 fist_force_control
> 3 velocity_verlet
> 2 qs_mol_dyn_low
> 1 CP2K
>
>
>
> Csilla Varnai
> cv... at cam.ac.uk
> Engineering Department
> University of Cambridge
> Trumpington Street, CB2 1PZ
> United Kingdom
>
>
> --~--~---------~--~----~------------~-------~--~----~
> You received this message because you are subscribed to the Google
> Groups "cp2k" group.
> To post to this group, send email to cp... at googlegroups.com
> To unsubscribe from this group, send email to cp2k-
> unsub... at googlegroups.com
> For more options, visit this group at http://groups.google.com/
> group/cp2k?hl=en
> -~----------~----~----~----~------~----~------~--~---
>
> <restart-test.inp>
More information about the CP2K-user
mailing list